RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 RC3H2Q9HBD1 1191 aaKnown RBP14.06□□□□□ -0.16
TCOF1-210ENST00000506767 RNF19AQ9NV58 838 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 PCDHB7Q9Y5E2 793 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 COL4A6Q14031 1691 aa14.06□□□□□ -0.16
TCOF1-210ENST00000506767 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-210ENST00000506767 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-210ENST00000506767 MEIS3P2A8K0S8 358 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 SOX1O00570 391 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-210ENST00000506767 FAM189A1O60320 539 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 DGKIO75912 1065 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 KIF20AO95235 890 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 PRCPP42785 496 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 SNRPFP62306 86 aaKnown RBP14.05□□□□□ -0.16
TCOF1-210ENST00000506767 NOLC1Q14978 699 aaKnown RBP eCLIP14.05□□□□□ -0.16
TCOF1-210ENST00000506767 FAM109BQ6ICB4 259 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-210ENST00000506767 SLFN12LQ6IEE8 588 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 AGMOQ6ZNB7 445 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 APBB1IPQ7Z5R6 666 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-210ENST00000506767 ZBTB33Q86T24 672 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 NELFCDQ8IXH7 590 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 SMYD4Q8IYR2 804 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-210ENST00000506767 SYCP3Q8IZU3 236 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 TMEM174Q8WUU8 243 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 PGBD4Q96DM1 585 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 LRCH3Q96II8 777 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 TCHPQ9BT92 498 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 TRIM6Q9C030 488 aaPredicted RBP14.05□□□□□ -0.16
TCOF1-210ENST00000506767 GBP3Q9H0R5 595 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 RNF39Q9H2S5 420 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 NXF3Q9H4D5 531 aaKnown RBP14.05□□□□□ -0.16
TCOF1-210ENST00000506767 TMEM63CQ9P1W3 806 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 HES2Q9Y543 173 aa14.05□□□□□ -0.16
TCOF1-210ENST00000506767 RANBP2P49792 3224 aaKnown RBP14.05□□□□□ -0.16
TCOF1-210ENST00000506767 FNDC1Q4ZHG4 1894 aaPredicted RBP14.04□□□□□ -0.16
TCOF1-210ENST00000506767 GRXCR1A8MXD5 290 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 PDXKO00764 312 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 INPPL1O15357 1258 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 UPP2O95045 317 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 GARTP22102 1010 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 GRM5P41594 1212 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 NFKBIBQ15653 356 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 LRIT3Q3SXY7 679 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 CLLU1OSQ5K130 101 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 CCDC183Q5T5S1 534 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 ISM2Q6H9L7 571 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 ADSSL1Q8N142 457 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 CEP120Q8N960 986 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 LPPQ93052 612 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 UBN1Q9NPG3 1134 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 SNTG2Q9NY99 539 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 CGNQ9P2M7 1197 aaKnown RBP14.04□□□□□ -0.16
TCOF1-210ENST00000506767 ANKFY1Q9P2R3 1169 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 LRFN2Q9ULH4 789 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 MAPK8IP1Q9UQF2 711 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 TRAF3IP3Q9Y228 551 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 GBF1Q92538 1859 aa14.04□□□□□ -0.16
TCOF1-210ENST00000506767 PPP1R3GB7ZBB8 358 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 BIN1O00499 593 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 OGTO15294 1046 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 OFD1O75665 1012 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 FGFR1P11362 822 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 ITGA4P13612 1032 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 CD44P16070 742 aaKnown RBP14.03□□□□□ -0.16
TCOF1-210ENST00000506767 C12orf56Q8IXR9 622 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 HACE1Q8IYU2 909 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 SP7Q8TDD2 431 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-210ENST00000506767 CASD1Q96PB1 797 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 RAD9AQ99638 391 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 CBWD1Q9BRT8 395 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 MSTO1Q9BUK6 570 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 AGPAT3Q9NRZ7 376 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 TYW1Q9NV66 732 aaKnown RBP14.03□□□□□ -0.16
TCOF1-210ENST00000506767 AGO2Q9UKV8 859 aaKnown RBP14.03□□□□□ -0.16
TCOF1-210ENST00000506767 GIT1Q9Y2X7 761 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 INSL6Q9Y581 213 aa14.03□□□□□ -0.16
TCOF1-210ENST00000506767 KIAA0391O15091 583 aaKnown RBP14.02□□□□□ -0.17
TCOF1-210ENST00000506767 MEFVO15553 781 aaPredicted RBP14.02□□□□□ -0.17
TCOF1-210ENST00000506767 HOXA2O43364 376 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 IBSPP21815 317 aaPredicted RBP14.02□□□□□ -0.17
TCOF1-210ENST00000506767 AKAP5P24588 427 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 PPP1R2P41236 205 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 GATMP50440 423 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 RABGGTBP53611 331 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 SMAD3P84022 425 aaKnown RBP14.02□□□□□ -0.17
TCOF1-210ENST00000506767 POU5F1Q01860 360 aaKnown RBP14.02□□□□□ -0.17
TCOF1-210ENST00000506767 NFIL3Q16649 462 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 KYAT1Q16773 422 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 SKOR2Q2VWA4 1001 aaPredicted RBP14.02□□□□□ -0.17
TCOF1-210ENST00000506767 ZCWPW2Q504Y3 356 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 SEZ6Q53EL9 994 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 XKR4Q5GH76 650 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 CENPPQ6IPU0 288 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 CAVIN1Q6NZI2 390 aaKnown RBP14.02□□□□□ -0.17
TCOF1-210ENST00000506767 FAM117BQ6P1L5 589 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 ARMCX5Q6P1M9 558 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 CRELD2Q6UXH1 353 aaPredicted RBP14.02□□□□□ -0.17
TCOF1-210ENST00000506767 ALKAL1Q6UXT8 129 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 HS2ST1Q7LGA3 356 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 TMEM192Q8IY95 271 aa14.02□□□□□ -0.17
TCOF1-210ENST00000506767 THNSL1Q8IYQ7 743 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms