RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 TTC4O95801 387 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 CYP11B2P19099 503 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 CHRNA5P30532 468 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 CGB2Q6NT52 195 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 EPM2AIP1Q7L775 607 aaPredicted RBP17.01■□□□□ 0.31
SCLT1-208ENST00000506368 CCDC105Q8IYK2 499 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 KCTD17Q8N5Z5 321 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 FAM84BQ96KN1 310 aaPredicted RBP17.01■□□□□ 0.31
SCLT1-208ENST00000506368 TIPINQ9BVW5 301 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 MYLK2Q9H1R3 596 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 LRRC19Q9H756 370 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 LARSQ9P2J5 1176 aaKnown RBP17.01■□□□□ 0.31
SCLT1-208ENST00000506368 PCDHA12Q9UN75 941 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 ALG6Q9Y672 507 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 COL11A2P13942 1736 aaPredicted RBP17.01■□□□□ 0.31
SCLT1-208ENST00000506368 COL4A1P02462 1669 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 RNF8O76064 485 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 MTA2O94776 668 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 KRT18P05783 430 aaKnown RBP17.01■□□□□ 0.31
SCLT1-208ENST00000506368 TAC1P20366 129 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 STAT4Q14765 748 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 LONRF1Q17RB8 773 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 ARHGAP22Q7Z5H3 698 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 MAIP1Q8WWC4 291 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 SLC35C1Q96A29 364 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 ZNF333Q96JL9 665 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 MKNK1Q9BUB5 465 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 STX8Q9UNK0 236 aa17.01■□□□□ 0.31
SCLT1-208ENST00000506368 MAGEA13PA6NCF6 341 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 TDP2O95551 362 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 PLCG2P16885 1265 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 TNFAIP3P21580 790 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 MARK3P27448 753 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 PTPN4P29074 926 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 KPNB1Q14974 876 aaKnown RBP17■□□□□ 0.31
SCLT1-208ENST00000506368 OR52E8Q6IFG1 317 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 MIGA2Q7L4E1 593 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 RELL1Q8IUW5 271 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 ANKRD42Q8N9B4 389 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 ANKLE1Q8NAG6 615 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 BBOF1Q8ND07 529 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 NLGN2Q8NFZ4 835 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 OLIG1Q8TAK6 271 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 ALG3Q92685 438 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 ERP27Q96DN0 273 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 FHDC1Q9C0D6 1143 aaPredicted RBP17■□□□□ 0.31
SCLT1-208ENST00000506368 KANSL2Q9H9L4 492 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 DMAP1Q9NPF5 467 aaPredicted RBP17■□□□□ 0.31
SCLT1-208ENST00000506368 DDX25Q9UHL0 483 aaKnown RBP17■□□□□ 0.31
SCLT1-208ENST00000506368 TRIM33Q9UPN9 1127 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 SLC4A7Q9Y6M7 1214 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 FRMPD4Q14CM0 1322 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 SPDYE5A6NIY4 337 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 MARCH6O60337 910 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 SF3A3Q12874 501 aaKnown RBP eCLIP17■□□□□ 0.31
SCLT1-208ENST00000506368 DCAF17Q5H9S7 520 aaPredicted RBP17■□□□□ 0.31
SCLT1-208ENST00000506368 RHBDF2Q6PJF5 856 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 SLC51AQ86UW1 340 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 GLYCTKQ8IVS8 523 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 LRRC8CQ8TDW0 803 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 EZH1Q92800 747 aaPredicted RBP17■□□□□ 0.31
SCLT1-208ENST00000506368 FGD4Q96M96 766 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 TBC1D10AQ9BXI6 508 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 FOXP3Q9BZS1 431 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 VCX3BQ9H321 246 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 VCX3AQ9NNX9 186 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 SENP1Q9P0U3 644 aa17■□□□□ 0.31
SCLT1-208ENST00000506368 FAM47DPA6NHR8 397 aa16.99■□□□□ 0.31
SCLT1-208ENST00000506368 IRF6O14896 467 aa16.99■□□□□ 0.31
SCLT1-208ENST00000506368 PSMC4P43686 418 aa16.99■□□□□ 0.31
SCLT1-208ENST00000506368 MOGSQ13724 837 aa16.99■□□□□ 0.31
SCLT1-208ENST00000506368 ECM1Q16610 540 aa16.99■□□□□ 0.31
SCLT1-208ENST00000506368 PPP1R15BQ5SWA1 713 aa16.99■□□□□ 0.31
SCLT1-208ENST00000506368 TTC27Q6P3X3 843 aa16.99■□□□□ 0.31
SCLT1-208ENST00000506368 LONP2Q86WA8 852 aa16.99■□□□□ 0.31
SCLT1-208ENST00000506368 SLC13A5Q86YT5 568 aaPredicted RBP16.99■□□□□ 0.31
SCLT1-208ENST00000506368 FGFBP2Q9BYJ0 223 aa16.99■□□□□ 0.31
SCLT1-208ENST00000506368 GLT8D2Q9H1C3 349 aa16.99■□□□□ 0.31
SCLT1-208ENST00000506368 TBC1D7Q9P0N9 293 aa16.99■□□□□ 0.31
SCLT1-208ENST00000506368 USP17L3A6NCW0 530 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 USP17L4A6NCW7 530 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 ZWINTO95229 277 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 NR3C1P04150 777 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 USP17L8P0C7I0 530 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 EVX2Q03828 476 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 ZNF211Q13398 564 aaPredicted RBP16.98■□□□□ 0.31
SCLT1-208ENST00000506368 KIF22Q14807 665 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 LRRC23Q53EV4 343 aaPredicted RBP16.98■□□□□ 0.31
SCLT1-208ENST00000506368 SLC45A4Q5BKX6 768 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 SLC10A5Q5PT55 438 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 USP17L1Q7RTZ2 530 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 PPFIBP2Q8ND30 876 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 GRK7Q8WTQ7 553 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 PIGSQ96S52 555 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 PAIP2Q9BPZ3 127 aaKnown RBP16.98■□□□□ 0.31
SCLT1-208ENST00000506368 PPCSQ9HAB8 311 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 DLGAP2Q9P1A6 1054 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 NAV1Q8NEY1 1877 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 AKAP3O75969 853 aa16.98■□□□□ 0.31
SCLT1-208ENST00000506368 PDHA1P08559 390 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms