RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 SYN1P17600 705 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 CASRP41180 1078 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 ODF1Q14990 250 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 NOMO1Q15155 1222 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 FUKQ8N0W3 1084 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 OR5M3Q8NGP4 307 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 ZNF480Q8WV37 535 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 ARL8AQ96BM9 186 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 HOOK2Q96ED9 719 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 PLA2G3Q9NZ20 509 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 SAP30BPQ9UHR5 308 aaKnown RBP7.47□□□□□ -1.21
NIPBL-205ENST00000505998 TUBD1Q9UJT1 453 aa7.47□□□□□ -1.21
NIPBL-205ENST00000505998 LUC7L2Q9Y383 392 aaKnown RBP7.47□□□□□ -1.21
NIPBL-205ENST00000505998 KIAA0556O60303 1618 aa7.46□□□□□ -1.21
NIPBL-205ENST00000505998 ECHS1P30084 290 aa7.46□□□□□ -1.22
NIPBL-205ENST00000505998 SLC16A1P53985 500 aa7.46□□□□□ -1.22
NIPBL-205ENST00000505998 PPP3CAQ08209 521 aa7.46□□□□□ -1.22
NIPBL-205ENST00000505998 LILRA6Q6PI73 481 aa7.46□□□□□ -1.22
NIPBL-205ENST00000505998 FAM111BQ6SJ93 734 aa7.46□□□□□ -1.22
NIPBL-205ENST00000505998 LOXL4Q96JB6 756 aa7.46□□□□□ -1.22
NIPBL-205ENST00000505998 GPRC5DQ9NZD1 345 aa7.46□□□□□ -1.22
NIPBL-205ENST00000505998 CNOT11Q9UKZ1 510 aaKnown RBP7.46□□□□□ -1.22
NIPBL-205ENST00000505998 SLC30A1Q9Y6M5 507 aa7.46□□□□□ -1.22
NIPBL-205ENST00000505998 PATE3B3GLJ2 98 aa7.45□□□□□ -1.22
NIPBL-205ENST00000505998 GASTP01350 101 aa7.45□□□□□ -1.22
NIPBL-205ENST00000505998 MSX2P35548 267 aaPredicted RBP7.45□□□□□ -1.22
NIPBL-205ENST00000505998 PER3P56645 1201 aa7.45□□□□□ -1.22
NIPBL-205ENST00000505998 KIF23Q02241 960 aaPredicted RBP7.45□□□□□ -1.22
NIPBL-205ENST00000505998 MCL1Q07820 350 aa7.45□□□□□ -1.22
NIPBL-205ENST00000505998 MST1LQ2TV78 715 aa7.45□□□□□ -1.22
NIPBL-205ENST00000505998 POLNQ7Z5Q5 900 aa7.45□□□□□ -1.22
NIPBL-205ENST00000505998 KRTAP1-3Q8IUG1 177 aa7.45□□□□□ -1.22
NIPBL-205ENST00000505998 THEMISQ8N1K5 641 aaPredicted RBP7.45□□□□□ -1.22
NIPBL-205ENST00000505998 NRG4Q8WWG1 115 aa7.45□□□□□ -1.22
NIPBL-205ENST00000505998 SAMD11Q96NU1 681 aa7.45□□□□□ -1.22
NIPBL-205ENST00000505998 CDC5LQ99459 802 aaKnown RBP7.45□□□□□ -1.22
NIPBL-205ENST00000505998 EPC1Q9H2F5 836 aa7.45□□□□□ -1.22
NIPBL-205ENST00000505998 DISP1Q96F81 1524 aa7.45□□□□□ -1.22
NIPBL-205ENST00000505998 FAM171A2A8MVW0 826 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 ZNF623O75123 536 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 ITGA10O75578 1167 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 CRHR1P34998 444 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 EPHB1P54762 984 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 MGAT2Q10469 447 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 FOXL1Q12952 345 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 ICAM4Q14773 271 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 TMEM240Q5SV17 173 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 D2HGDHQ8N465 521 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 CHST13Q8NET6 341 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 DNERQ8NFT8 737 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 IL17RAQ96F46 866 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 UHRF1Q96T88 793 aaPredicted RBP7.44□□□□□ -1.22
NIPBL-205ENST00000505998 ENKD1Q9H0I2 346 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 IP6K2Q9UHH9 426 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 INTUQ9ULD6 942 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 TNIKQ9UKE5 1360 aa7.44□□□□□ -1.22
NIPBL-205ENST00000505998 E2F8A0AVK6 867 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 ENDOD1O94919 500 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 CT47B1P0C2W7 299 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-205ENST00000505998 GZMKP49863 264 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 ADKP55263 362 aaKnown RBP7.43□□□□□ -1.22
NIPBL-205ENST00000505998 PIN1Q13526 163 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-205ENST00000505998 HS1BP3Q53T59 392 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 FKBP15Q5T1M5 1219 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 Q6ZVL8 140 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 PDZD4Q76G19 769 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-205ENST00000505998 CMTR2Q8IYT2 770 aaKnown RBP7.43□□□□□ -1.22
NIPBL-205ENST00000505998 MIER2Q8N344 545 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 CPA6Q8N4T0 437 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 LILRA3Q8N6C8 439 aaPredicted RBP7.43□□□□□ -1.22
NIPBL-205ENST00000505998 OR7D4Q8NG98 312 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 Q8TCH9 128 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 DPF2Q92785 391 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 MPHOSPH9Q99550 1183 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 CSRNP2Q9H175 543 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 BCO1Q9HAY6 547 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 TRPS1Q9UHF7 1281 aa7.43□□□□□ -1.22
NIPBL-205ENST00000505998 ARHGEF11O15085 1522 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 RIMBP3CA6NJZ7 1639 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 RIMBP3BA6NNM3 1639 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 RIMBP3Q9UFD9 1639 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 BTBD11A6QL63 1104 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 AKAP10O43572 662 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 IL33O95760 270 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 COMTP21964 271 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 RAB27AP51159 221 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 APBA1Q02410 837 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 HHEXQ03014 270 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 UAP1L1Q3KQV9 507 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 MFSD5Q6N075 450 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 PQLC1Q8N2U9 271 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 JDP2Q8WYK2 163 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 ZNF512Q96ME7 567 aaPredicted RBP7.42□□□□□ -1.22
NIPBL-205ENST00000505998 C7orf25Q9BPX7 421 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 DEF6Q9H4E7 631 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 ST6GALNAC2Q9UJ37 374 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 THRAP3Q9Y2W1 955 aaKnown RBP7.42□□□□□ -1.22
NIPBL-205ENST00000505998 GIT1Q9Y2X7 761 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 SH3BP1Q9Y3L3 701 aa7.42□□□□□ -1.22
NIPBL-205ENST00000505998 ERCC6L2Q5T890 1561 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms