RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 ZNF623O75123 536 aa12.9□□□□□ -0.34
TNPO1-202ENST00000503084 SEC24BO95487 1268 aa12.9□□□□□ -0.34
TNPO1-202ENST00000503084 FCARP24071 287 aa12.9□□□□□ -0.34
TNPO1-202ENST00000503084 TMOD1P28289 359 aa12.9□□□□□ -0.34
TNPO1-202ENST00000503084 HOXA6P31267 233 aa12.9□□□□□ -0.34
TNPO1-202ENST00000503084 KIF5BP33176 963 aa12.9□□□□□ -0.34
TNPO1-202ENST00000503084 OR1G1P47890 313 aa12.9□□□□□ -0.34
TNPO1-202ENST00000503084 PABPC1LQ4VXU2 614 aaKnown RBP12.9□□□□□ -0.34
TNPO1-202ENST00000503084 WDR44Q5JSH3 913 aa12.9□□□□□ -0.34
TNPO1-202ENST00000503084 PPM1LQ5SGD2 360 aa12.9□□□□□ -0.34
TNPO1-202ENST00000503084 SWSAP1Q6NVH7 229 aa12.9□□□□□ -0.34
TNPO1-202ENST00000503084 RSAD1Q9HA92 442 aa12.9□□□□□ -0.34
TNPO1-202ENST00000503084 LY9Q9HBG7 655 aa12.9□□□□□ -0.34
TNPO1-202ENST00000503084 FNIP2Q9P278 1114 aa12.9□□□□□ -0.34
TNPO1-202ENST00000503084 MYH9P35579 1960 aaKnown RBP12.89□□□□□ -0.35
TNPO1-202ENST00000503084 SPDYE3A6NKU9 549 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 XYLBO75191 536 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 MX1P20591 662 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 PXNP49023 591 aaPredicted RBP12.89□□□□□ -0.35
TNPO1-202ENST00000503084 SLC5A9Q2M3M2 681 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 MIS18BP1Q6P0N0 1132 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 COLGALT2Q8IYK4 626 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 ZNF710Q8N1W2 664 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 ELSPBP1Q96BH3 223 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 EVI5LQ96CN4 794 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 PGBD4Q96DM1 585 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 MCRS1Q96EZ8 462 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 PSTPIP2Q9H939 334 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 IGSF5Q9NSI5 407 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 KCNH3Q9ULD8 1083 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 PCDHA6Q9UN73 950 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 CEP131Q9UPN4 1083 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 PCDHB2Q9Y5E7 798 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 PCDHA8Q9Y5H6 950 aa12.89□□□□□ -0.35
TNPO1-202ENST00000503084 NRG2O14511 850 aaPredicted RBP12.88□□□□□ -0.35
TNPO1-202ENST00000503084 C1QL1O75973 258 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 CCDC192P0DO97 292 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 CEBPBP17676 345 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 SFPQP23246 707 aaKnown RBP eCLIP12.88□□□□□ -0.35
TNPO1-202ENST00000503084 CCNE1P24864 410 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 HOXA9P31269 272 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 CREMQ03060 361 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 C19orf57Q0VDD7 668 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 DRP2Q13474 957 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 LRRC32Q14392 662 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 LARP1BQ659C4 914 aaKnown RBP12.88□□□□□ -0.35
TNPO1-202ENST00000503084 FUT10Q6P4F1 479 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 PRSS55Q6UWB4 352 aaPredicted RBP12.88□□□□□ -0.35
TNPO1-202ENST00000503084 CYB5R4Q7L1T6 521 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 SLC7A14Q8TBB6 771 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 LRIG1Q96JA1 1093 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 MKNK1Q9BUB5 465 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 GCOM2Q9BZD3 368 aaPredicted RBP12.88□□□□□ -0.35
TNPO1-202ENST00000503084 GPR62Q9BZJ7 368 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 DCTPP1Q9H773 170 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 SENP2Q9HC62 589 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 GDE1Q9NZC3 331 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 DNMT3BQ9UBC3 853 aaKnown RBP12.88□□□□□ -0.35
TNPO1-202ENST00000503084 MRPS23Q9Y3D9 190 aaKnown RBP12.88□□□□□ -0.35
TNPO1-202ENST00000503084 PTPN13Q12923 2485 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 CNTNAP2Q9UHC6 1331 aa12.88□□□□□ -0.35
TNPO1-202ENST00000503084 POU2F2P09086 479 aa12.87□□□□□ -0.35
TNPO1-202ENST00000503084 PLA2G2AP14555 144 aa12.87□□□□□ -0.35
TNPO1-202ENST00000503084 FGD1P98174 961 aa12.87□□□□□ -0.35
TNPO1-202ENST00000503084 MAP4K3Q8IVH8 894 aa12.87□□□□□ -0.35
TNPO1-202ENST00000503084 GPR65Q8IYL9 337 aa12.87□□□□□ -0.35
TNPO1-202ENST00000503084 HNRNPLLQ8WVV9 542 aaKnown RBP12.87□□□□□ -0.35
TNPO1-202ENST00000503084 IRF7Q92985 503 aa12.87□□□□□ -0.35
TNPO1-202ENST00000503084 RRP36Q96EU6 259 aaKnown RBP12.87□□□□□ -0.35
TNPO1-202ENST00000503084 TRMT61BQ9BVS5 477 aaKnown RBP12.87□□□□□ -0.35
TNPO1-202ENST00000503084 KRT23Q9C075 422 aa12.87□□□□□ -0.35
TNPO1-202ENST00000503084 ZNF334Q9HCZ1 680 aaPredicted RBP12.87□□□□□ -0.35
TNPO1-202ENST00000503084 TMEM9BQ9NQ34 198 aa12.87□□□□□ -0.35
TNPO1-202ENST00000503084 KANSL3Q9P2N6 904 aa12.87□□□□□ -0.35
TNPO1-202ENST00000503084 MAFBQ9Y5Q3 323 aaPredicted RBP12.87□□□□□ -0.35
TNPO1-202ENST00000503084 EML5Q05BV3 1969 aa12.87□□□□□ -0.35
TNPO1-202ENST00000503084 SALL3Q9BXA9 1300 aa12.87□□□□□ -0.35
TNPO1-202ENST00000503084 MS4A1P11836 297 aa12.86□□□□□ -0.35
TNPO1-202ENST00000503084 GDI1P31150 447 aa12.86□□□□□ -0.35
TNPO1-202ENST00000503084 DSC1Q08554 894 aa12.86□□□□□ -0.35
TNPO1-202ENST00000503084 SCAPQ12770 1279 aa12.86□□□□□ -0.35
TNPO1-202ENST00000503084 USP41Q3LFD5 358 aa12.86□□□□□ -0.35
TNPO1-202ENST00000503084 CEP55Q53EZ4 464 aa12.86□□□□□ -0.35
TNPO1-202ENST00000503084 RTP2Q5QGT7 225 aa12.86□□□□□ -0.35
TNPO1-202ENST00000503084 PGBD1Q96JS3 809 aa12.86□□□□□ -0.35
TNPO1-202ENST00000503084 SPZ1Q9BXG8 430 aa12.86□□□□□ -0.35
TNPO1-202ENST00000503084 TRPV5Q9NQA5 729 aa12.86□□□□□ -0.35
TNPO1-202ENST00000503084 SEC63Q9UGP8 760 aaKnown RBP12.86□□□□□ -0.35
TNPO1-202ENST00000503084 PCNX2A6NKB5 2137 aa12.86□□□□□ -0.35
TNPO1-202ENST00000503084 PDCD11Q14690 1871 aaKnown RBP12.85□□□□□ -0.35
TNPO1-202ENST00000503084 PIEZO2Q9H5I5 2752 aa12.85□□□□□ -0.35
TNPO1-202ENST00000503084 A0A087WZ62 844 aa12.85□□□□□ -0.35
TNPO1-202ENST00000503084 SPAARA0A1B0GVQ0 90 aa12.85□□□□□ -0.35
TNPO1-202ENST00000503084 EXTL3O43909 919 aa12.85□□□□□ -0.35
TNPO1-202ENST00000503084 CAVIN2O95810 425 aa12.85□□□□□ -0.35
TNPO1-202ENST00000503084 RHOP08100 348 aa12.85□□□□□ -0.35
TNPO1-202ENST00000503084 CREB5Q02930 508 aa12.85□□□□□ -0.35
TNPO1-202ENST00000503084 PLK5Q496M5 336 aa12.85□□□□□ -0.35
TNPO1-202ENST00000503084 FAM78AQ5JUQ0 283 aa12.85□□□□□ -0.35
TNPO1-202ENST00000503084 CATSPER4Q7RTX7 472 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms