RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, human

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTTN-208	ENST00000498223	NOLC1	Q14978	699 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	STX1A	Q16623	288 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	BMT2	Q1RMZ1	405 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	TMEM240	Q5SV17	173 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	RBM43	Q6ZSC3	357 aa	Known RBP	12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	SLC24A5	Q71RS6	500 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	THNSL1	Q8IYQ7	743 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	ADSSL1	Q8N142	457 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	MLKL	Q8NB16	471 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	GOLGA5	Q8TBA6	731 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	NELFB	Q8WX92	580 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	MSTO1	Q9BUK6	570 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	EIF2A	Q9BY44	585 aa	Known RBP	12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	PCIF1	Q9H4Z3	704 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	RGS18	Q9NS28	235 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	FAM105A	Q9NUU6	356 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	TYW1	Q9NV66	732 aa	Known RBP	12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	ANO10	Q9NW15	660 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	RNF216	Q9NWF9	866 aa	Predicted RBP	12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	PARP2	Q9UGN5	583 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	PCDHB7	Q9Y5E2	793 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	PCDHB2	Q9Y5E7	798 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	COL6A3	P12111	3177 aa		12.51	□□□□□ -0.41
CTTN-208	ENST00000498223	BICDL2	A1A5D9	508 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	PIGR	P01833	764 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	STAG3L1	P0CL83	205 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	CCDC192	P0DO97	292 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	MCF2	P10911	925 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	ITGA4	P13612	1032 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	CD44	P16070	742 aa	Known RBP	12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	HOXD13	P35453	343 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	STX17	P56962	302 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	OSTN	P61366	133 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	PAK1	Q13153	545 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	TPD52L1	Q16890	204 aa	Predicted RBP	12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	ZSCAN23	Q3MJ62	389 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	ZNF697	Q5TEC3	545 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	FAM117B	Q6P1L5	589 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	C16orf59	Q7L2K0	433 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	KCNN1	Q92952	543 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	P2RX5	Q93086	422 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	PGBD4	Q96DM1	585 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	DHTKD1	Q96HY7	919 aa	Predicted RBP	12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	RNPC3	Q96LT9	517 aa	Known RBP	12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	CCDC94	Q9BW85	323 aa	Predicted RBP	12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	CDT1	Q9H211	546 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	CGN	Q9P2M7	1197 aa	Known RBP	12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	AGO2	Q9UKV8	859 aa	Known RBP	12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	SLC4A7	Q9Y6M7	1214 aa		12.5	□□□□□ -0.41
CTTN-208	ENST00000498223	ZMYM2	Q9UBW7	1377 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	GOLGA8IP	A6NC78	632 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	GOLGA8J	A6NMD2	632 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	PPP1R3G	B7ZBB8	358 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223		C9IYK1	514 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	PDXK	O00764	312 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	OGT	O15294	1046 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	TGFB1I1	O43294	461 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	LDHA	P00338	332 aa	Known RBP	12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	BMP6	P22004	513 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	GART	P22102	1010 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	CCNE1	P24864	410 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	YARS	P54577	528 aa	Known RBP	12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	WDR5	P61964	334 aa	Known RBP	12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	SNRPF	P62306	86 aa	Known RBP	12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	TYRO3	Q06418	890 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	DPCR1	Q3MIW9	517 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	SEZ6	Q53EL9	994 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	COBLL1	Q53SF7	1204 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	UBXN11	Q5T124	520 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	SLC39A4	Q6P5W5	647 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	ECHDC2	Q86YB7	292 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	LINC01599	Q8WXQ3	324 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	HERVK_113	Q902F9	699 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	VWCE	Q96DN2	955 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	FAM212A	Q96EL1	285 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	SAAL1	Q96ER3	474 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	GUCD1	Q96NT3	240 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	ZBED2	Q9BTP6	218 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	NXF3	Q9H4D5	531 aa	Known RBP	12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	AGPAT3	Q9NRZ7	376 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	HES2	Q9Y543	173 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	IPP	Q9Y573	584 aa		12.49	□□□□□ -0.41
CTTN-208	ENST00000498223	NLRC5	Q86WI3	1866 aa		12.48	□□□□□ -0.41
CTTN-208	ENST00000498223		A0A0U1RQF3	1178 aa		12.48	□□□□□ -0.41
CTTN-208	ENST00000498223	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	12.48	□□□□□ -0.41
CTTN-208	ENST00000498223	TRIM49B	A6NDI0	452 aa		12.48	□□□□□ -0.41
CTTN-208	ENST00000498223	KIAA0391	O15091	583 aa	Known RBP	12.48	□□□□□ -0.41
CTTN-208	ENST00000498223	EXOC3	O60645	756 aa		12.48	□□□□□ -0.41
CTTN-208	ENST00000498223	NR3C1	P04150	777 aa		12.48	□□□□□ -0.41
CTTN-208	ENST00000498223	PROZ	P22891	400 aa		12.48	□□□□□ -0.41
CTTN-208	ENST00000498223	RPL13	P26373	211 aa	Known RBP	12.48	□□□□□ -0.41
CTTN-208	ENST00000498223	DEFB103A	P81534	67 aa		12.48	□□□□□ -0.41
CTTN-208	ENST00000498223	MCL1	Q07820	350 aa		12.48	□□□□□ -0.41
CTTN-208	ENST00000498223	HSP90AA2P	Q14568	343 aa	Predicted RBP	12.48	□□□□□ -0.41
CTTN-208	ENST00000498223	KYAT1	Q16773	422 aa		12.48	□□□□□ -0.41
CTTN-208	ENST00000498223	CEP135	Q66GS9	1140 aa		12.48	□□□□□ -0.41

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