RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 MRFAP1Q9Y605 127 aa3.87□□□□□ -1.79
RIF1-212ENST00000498041 CECR2Q9BXF3 1484 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 KLHL33A6NCF5 533 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 ITGA10O75578 1167 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 STC2O76061 302 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 IPO13O94829 963 aaKnown RBP3.86□□□□□ -1.79
RIF1-212ENST00000498041 GNAT2P19087 354 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 ECHS1P30084 290 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 ADSLP30566 484 aaPredicted RBP3.86□□□□□ -1.79
RIF1-212ENST00000498041 CRHR1P34998 444 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 MCAMP43121 646 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 KRT85P78386 507 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 APBA1Q02410 837 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 ACAP2Q15057 778 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 MST1LQ2TV78 715 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 BRDTQ58F21 947 aaPredicted RBP3.86□□□□□ -1.79
RIF1-212ENST00000498041 PDZD4Q76G19 769 aaPredicted RBP3.86□□□□□ -1.79
RIF1-212ENST00000498041 RPUSD2Q8IZ73 545 aaKnown RBP3.86□□□□□ -1.79
RIF1-212ENST00000498041 LILRA3Q8N6C8 439 aaPredicted RBP3.86□□□□□ -1.79
RIF1-212ENST00000498041 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.86□□□□□ -1.79
RIF1-212ENST00000498041 ST8SIA2Q92186 375 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 SLC2A13Q96QE2 648 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 ASPSCR1Q9BZE9 553 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 GIT1Q9Y2X7 761 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 PCDHGA2Q9Y5H1 932 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 HS3ST3A1Q9Y663 406 aa3.86□□□□□ -1.79
RIF1-212ENST00000498041 XPOTO43592 962 aaKnown RBP3.85□□□□□ -1.79
RIF1-212ENST00000498041 AMHP03971 560 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 GSPT1P15170 499 aaKnown RBP3.85□□□□□ -1.79
RIF1-212ENST00000498041 CCND1P24385 295 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 ACRV1P26436 265 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 PPP3CAQ08209 521 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 NOMO1Q15155 1222 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 PCBP2Q15366 365 aaKnown RBP eCLIP3.85□□□□□ -1.79
RIF1-212ENST00000498041 PTPN21Q16825 1174 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 FAM214AQ32MH5 1076 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 SPDYAQ5MJ70 313 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 Q6ZVL8 140 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 FAM83AQ86UY5 434 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 ELOA2Q8IYF1 753 aaPredicted RBP3.85□□□□□ -1.79
RIF1-212ENST00000498041 Q8N1X5 172 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 MDGA1Q8NFP4 955 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 OR7D4Q8NG98 312 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 JADE3Q92613 823 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 CPPED1Q9BRF8 314 aaPredicted RBP3.85□□□□□ -1.79
RIF1-212ENST00000498041 PDCD2LQ9BRP1 358 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 SLC13A1Q9BZW2 595 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 VPS11Q9H270 941 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 BCO1Q9HAY6 547 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 DMRT3Q9NQL9 472 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 TYW1Q9NV66 732 aaKnown RBP3.85□□□□□ -1.79
RIF1-212ENST00000498041 AURKAIP1Q9NWT8 199 aaPredicted RBP3.85□□□□□ -1.79
RIF1-212ENST00000498041 TRPS1Q9UHF7 1281 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 DNM3Q9UQ16 869 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 HDAC5Q9UQL6 1122 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 TNKSO95271 1327 aa3.85□□□□□ -1.79
RIF1-212ENST00000498041 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 FAM171A2A8MVW0 826 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 FZD9O00144 591 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 PCDHGA12O60330 932 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 NDUFS2O75306 463 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 ENDOD1O94919 500 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 HSP90B1P14625 803 aaKnown RBP3.84□□□□□ -1.79
RIF1-212ENST00000498041 WASP42768 502 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 MAN2A2P49641 1150 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 PER3P56645 1201 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 EXOSC10Q01780 885 aaKnown RBP3.84□□□□□ -1.79
RIF1-212ENST00000498041 MGAT2Q10469 447 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 CRHR2Q13324 411 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 CNGB1Q14028 1251 aaPredicted RBP3.84□□□□□ -1.79
RIF1-212ENST00000498041 USP39Q53GS9 565 aaKnown RBP3.84□□□□□ -1.79
RIF1-212ENST00000498041 METTL24Q5JXM2 366 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 PRAMEF14Q5SWL7 426 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 USP51Q70EK9 711 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 DOK3Q7L591 496 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 PNMA8AQ86V59 439 aaPredicted RBP3.84□□□□□ -1.79
RIF1-212ENST00000498041 PQLC1Q8N2U9 271 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 PPM1NQ8N819 430 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 MB21D1Q8N884 522 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 MDM1Q8TC05 714 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 ATXN2LQ8WWM7 1075 aaKnown RBP3.84□□□□□ -1.79
RIF1-212ENST00000498041 UHRF1Q96T88 793 aaPredicted RBP3.84□□□□□ -1.79
RIF1-212ENST00000498041 SMAD5Q99717 465 aaKnown RBP3.84□□□□□ -1.79
RIF1-212ENST00000498041 SAP30BPQ9UHR5 308 aaKnown RBP3.84□□□□□ -1.79
RIF1-212ENST00000498041 CLCA2Q9UQC9 943 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 PCDHGA9Q9Y5G4 932 aaKnown RBP3.84□□□□□ -1.79
RIF1-212ENST00000498041 PCDHGA8Q9Y5G5 932 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 PCDHGA7Q9Y5G6 932 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 PCDHGA6Q9Y5G7 932 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 PCDHGA3Q9Y5H0 932 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 ZMYM3Q14202 1370 aa3.84□□□□□ -1.79
RIF1-212ENST00000498041 GOLGA6L6A8MZA4 724 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 B5MCH6 92 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 C5AR1P21730 350 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 PTPN7P35236 360 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 SREBF1P36956 1147 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 FLT3LGP49771 235 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 SCNN1GP51170 649 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 RABGGTBP53611 331 aa3.83□□□□□ -1.8
RIF1-212ENST00000498041 SLC16A1P53985 500 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms