RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 NEMFO60524 1076 aa18.69■□□□□ 0.58
TRAPPC3-207ENST00000497251 ARF4P18085 180 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC3-207ENST00000497251 RARRES1P49788 294 aa18.69■□□□□ 0.58
TRAPPC3-207ENST00000497251 GRIK3Q13003 919 aa18.69■□□□□ 0.58
TRAPPC3-207ENST00000497251 TRIM29Q14134 588 aa18.69■□□□□ 0.58
TRAPPC3-207ENST00000497251 AMHR2Q16671 573 aa18.69■□□□□ 0.58
TRAPPC3-207ENST00000497251 KANK3Q6NY19 840 aa18.69■□□□□ 0.58
TRAPPC3-207ENST00000497251 MCPH1Q8NEM0 835 aa18.69■□□□□ 0.58
TRAPPC3-207ENST00000497251 EIF2AQ9BY44 585 aaKnown RBP18.69■□□□□ 0.58
TRAPPC3-207ENST00000497251 PRG3Q9Y2Y8 225 aaPredicted RBP18.69■□□□□ 0.58
TRAPPC3-207ENST00000497251 SPTBN4Q9H254 2564 aa18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 ZBTB39O15060 712 aa18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 CTDNEP1O95476 244 aa18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 AOC1P19801 751 aa18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 MLH1P40692 756 aa18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 FOXK2Q01167 660 aa18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 CAPSQ13938 189 aa18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 FAM187BQ17R55 369 aa18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 PPP4R3CPQ6ZMV5 832 aa18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 MTMR9Q96QG7 549 aa18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 RNF39Q9H2S5 420 aa18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 TUFT1Q9NNX1 390 aa18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 PRMT7Q9NVM4 692 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 FBXL21Q9UKT6 434 aa18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 DENND4AQ7Z401 1863 aa18.68■□□□□ 0.58
TRAPPC3-207ENST00000497251 GVINP1Q7Z2Y8 2422 aa18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 C2CD2LO14523 706 aa18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 FDPSP14324 419 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 GLRA2P23416 452 aa18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 SCNN1GP51170 649 aa18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 NR5A1Q13285 461 aa18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 ORC2Q13416 577 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 EARS2Q5JPH6 523 aaKnown RBP18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 FUT10Q6P4F1 479 aa18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 PDXDC1Q6P996 788 aa18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 GTF3C6Q969F1 213 aa18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 C2orf40Q9H1Z8 148 aa18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 BMP2KQ9NSY1 1161 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 FAM86C1Q9NVL1 165 aa18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 ADAM28Q9UKQ2 775 aa18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 CLUHO75153 1309 aa18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 CFAP54Q96N23 3096 aa18.67■□□□□ 0.58
TRAPPC3-207ENST00000497251 MUTP22033 750 aa18.66■□□□□ 0.58
TRAPPC3-207ENST00000497251 ELAVL2Q12926 359 aaKnown RBP18.66■□□□□ 0.58
TRAPPC3-207ENST00000497251 RTL10Q7L3V2 364 aa18.66■□□□□ 0.58
TRAPPC3-207ENST00000497251 GSTCDQ8NEC7 633 aa18.66■□□□□ 0.58
TRAPPC3-207ENST00000497251 ASAP3Q8TDY4 903 aa18.66■□□□□ 0.58
TRAPPC3-207ENST00000497251 SMG7Q92540 1137 aaKnown RBP18.66■□□□□ 0.58
TRAPPC3-207ENST00000497251 CPB2Q96IY4 423 aa18.66■□□□□ 0.58
TRAPPC3-207ENST00000497251 ZFP42Q96MM3 310 aa18.66■□□□□ 0.58
TRAPPC3-207ENST00000497251 NACC1Q96RE7 527 aa18.66■□□□□ 0.58
TRAPPC3-207ENST00000497251 SEMA4AQ9H3S1 761 aa18.66■□□□□ 0.58
TRAPPC3-207ENST00000497251 GJB4Q9NTQ9 266 aa18.66■□□□□ 0.58
TRAPPC3-207ENST00000497251 HES2Q9Y543 173 aa18.66■□□□□ 0.58
TRAPPC3-207ENST00000497251 GBP2P32456 591 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 TXKP42681 527 aa18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 SAFBQ15424 915 aaKnown RBP eCLIP18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 LILRA6Q6PI73 481 aa18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 TAS1R1Q7RTX1 841 aa18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 ZBTB8OSQ8IWT0 167 aa18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 CCDC105Q8IYK2 499 aa18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 FLCNQ8NFG4 579 aa18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 PRKD2Q9BZL6 878 aa18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 NT5C3AQ9H0P0 336 aa18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 POLR3FQ9H1D9 316 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 FZD8Q9H461 694 aa18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 NXF3Q9H4D5 531 aaKnown RBP18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 PIDD1Q9HB75 910 aa18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 MIOSQ9NXC5 875 aa18.65■□□□□ 0.58
TRAPPC3-207ENST00000497251 SF3B1O75533 1304 aaKnown RBP eCLIP18.65■□□□□ 0.586e-6■■■■■ 103.4
TRAPPC3-207ENST00000497251 EP300Q09472 2414 aaPredicted RBP18.64■□□□□ 0.58
TRAPPC3-207ENST00000497251 BTBD18B2RXH4 712 aa18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 N4BP3O15049 544 aa18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 TGM5O43548 720 aa18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 TADA2AO75478 443 aa18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 HNRNPA1P09651 372 aaKnown RBP eCLIP18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 SRFP11831 508 aa18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 NPR3P17342 541 aa18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 TUSC3Q13454 348 aa18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 CDCA2Q69YH5 1023 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 CWF19L1Q69YN2 538 aaKnown RBP18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 DIS3L2Q8IYB7 885 aaKnown RBP18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 ERMNQ8TAM6 284 aa18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 NKD2Q969F2 451 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 ADPGKQ9BRR6 497 aa18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 POLR3CQ9BUI4 534 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 SMOC2Q9H3U7 446 aa18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 MTCL1Q9Y4B5 1905 aaKnown RBP18.64■□□□□ 0.57
TRAPPC3-207ENST00000497251 TDRD15B5MCY1 1934 aaKnown RBP18.63■□□□□ 0.57
TRAPPC3-207ENST00000497251 LRRIQ4A6NIV6 560 aa18.63■□□□□ 0.57
TRAPPC3-207ENST00000497251 NPTXRO95502 500 aa18.63■□□□□ 0.57
TRAPPC3-207ENST00000497251 HOXA9P31269 272 aa18.63■□□□□ 0.57
TRAPPC3-207ENST00000497251 HSP90AA2PQ14568 343 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC3-207ENST00000497251 PPP2R5AQ15172 486 aa18.63■□□□□ 0.57
TRAPPC3-207ENST00000497251 MAPK6Q16659 721 aa18.63■□□□□ 0.57
TRAPPC3-207ENST00000497251 ME3Q16798 604 aa18.63■□□□□ 0.57
TRAPPC3-207ENST00000497251 APBB1IPQ7Z5R6 666 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC3-207ENST00000497251 SIX5Q8N196 739 aa18.63■□□□□ 0.57
TRAPPC3-207ENST00000497251 SLC44A3Q8N4M1 653 aa18.63■□□□□ 0.57
TRAPPC3-207ENST00000497251 NSUN7Q8NE18 718 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms