RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 PCDHB2Q9Y5E7 798 aa20.05■□□□□ 0.8
TSSC4-210ENST00000496468 A0A0U1RQF3 1178 aa20.04■□□□□ 0.8
TSSC4-210ENST00000496468 C9IYK1 514 aa20.04■□□□□ 0.8
TSSC4-210ENST00000496468 PDXKO00764 312 aa20.04■□□□□ 0.8
TSSC4-210ENST00000496468 AMHP03971 560 aa20.04■□□□□ 0.8
TSSC4-210ENST00000496468 RTN4RL1Q86UN2 441 aaPredicted RBP20.04■□□□□ 0.8
TSSC4-210ENST00000496468 ECHDC2Q86YB7 292 aa20.04■□□□□ 0.8
TSSC4-210ENST00000496468 NELFBQ8WX92 580 aa20.04■□□□□ 0.8
TSSC4-210ENST00000496468 P2RX5Q93086 422 aa20.04■□□□□ 0.8
TSSC4-210ENST00000496468 DHTKD1Q96HY7 919 aaPredicted RBP20.04■□□□□ 0.8
TSSC4-210ENST00000496468 GDF15Q99988 308 aa20.04■□□□□ 0.8
TSSC4-210ENST00000496468 CBWD1Q9BRT8 395 aa20.04■□□□□ 0.8
TSSC4-210ENST00000496468 RNF216Q9NWF9 866 aaPredicted RBP20.04■□□□□ 0.8
TSSC4-210ENST00000496468 IPPQ9Y573 584 aa20.04■□□□□ 0.8
TSSC4-210ENST00000496468 STYXL1Q9Y6J8 313 aa20.04■□□□□ 0.8
TSSC4-210ENST00000496468 RALGAPA2Q2PPJ7 1873 aa20.04■□□□□ 0.8
TSSC4-210ENST00000496468 PTPRSQ13332 1948 aa20.04■□□□□ 0.8
TSSC4-210ENST00000496468 A0A0B4J269 797 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 BICDL2A1A5D9 508 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 PPP1R3GB7ZBB8 358 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 ENPP3O14638 875 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 CCDC192P0DO97 292 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 ADSSP30520 456 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 DEFB103AP81534 67 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 ZCWPW2Q504Y3 356 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.03■□□□□ 0.8
TSSC4-210ENST00000496468 NPAS4Q8IUM7 802 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 RNF169Q8NCN4 708 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 RNPC3Q96LT9 517 aaKnown RBP20.03■□□□□ 0.8
TSSC4-210ENST00000496468 APOL6Q9BWW8 343 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 HAPLN2Q9GZV7 340 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 SEMA6BQ9H3T3 888 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 AGO2Q9UKV8 859 aaKnown RBP20.03■□□□□ 0.8
TSSC4-210ENST00000496468 LRFN2Q9ULH4 789 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 TRAF3IP3Q9Y228 551 aa20.03■□□□□ 0.8
TSSC4-210ENST00000496468 KIAA0391O15091 583 aaKnown RBP20.02■□□□□ 0.8
TSSC4-210ENST00000496468 CLIC2O15247 247 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 OGTO15294 1046 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 NR3C1P04150 777 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 ATF7P17544 494 aaPredicted RBP20.02■□□□□ 0.8
TSSC4-210ENST00000496468 CCNE1P24864 410 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 GRM5P41594 1212 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 CYP2J2P51589 502 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 LRRC63Q05C16 580 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 CENPPQ6IPU0 288 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 C12orf56Q8IXR9 622 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 THNSL1Q8IYQ7 743 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 CEP120Q8N960 986 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 SMG8Q8ND04 991 aaKnown RBP20.02■□□□□ 0.8
TSSC4-210ENST00000496468 NOC3LQ8WTT2 800 aaKnown RBP20.02■□□□□ 0.8
TSSC4-210ENST00000496468 PGBD4Q96DM1 585 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 SAAL1Q96ER3 474 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 CCDC94Q9BW85 323 aaPredicted RBP20.02■□□□□ 0.8
TSSC4-210ENST00000496468 ELAC1Q9H777 363 aaKnown RBP20.02■□□□□ 0.8
TSSC4-210ENST00000496468 TMEM161AQ9NX61 479 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 HSPBP1Q9NZL4 362 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 CXXC1Q9P0U4 656 aaPredicted RBP20.02■□□□□ 0.8
TSSC4-210ENST00000496468 HES2Q9Y543 173 aa20.02■□□□□ 0.8
TSSC4-210ENST00000496468 PDE4DIPQ5VU43 2346 aa20.01■□□□□ 0.79
TSSC4-210ENST00000496468 TRIM49BA6NDI0 452 aa20.01■□□□□ 0.79
TSSC4-210ENST00000496468 ZNF623O75123 536 aa20.01■□□□□ 0.79
TSSC4-210ENST00000496468 STAG3L1P0CL83 205 aa20.01■□□□□ 0.79
TSSC4-210ENST00000496468 ITGA4P13612 1032 aa20.01■□□□□ 0.79
TSSC4-210ENST00000496468 NR2F2P24468 414 aa20.01■□□□□ 0.79
TSSC4-210ENST00000496468 NFIL3Q16649 462 aa20.01■□□□□ 0.79
TSSC4-210ENST00000496468 KYAT1Q16773 422 aa20.01■□□□□ 0.79
TSSC4-210ENST00000496468 EDRF1Q3B7T1 1238 aa20.01■□□□□ 0.79
TSSC4-210ENST00000496468 C9orf50Q5SZB4 431 aa20.01■□□□□ 0.79
TSSC4-210ENST00000496468 ZNF598Q86UK7 904 aaKnown RBP20.01■□□□□ 0.79
TSSC4-210ENST00000496468 SLC9A7Q96T83 725 aa20.01■□□□□ 0.79
TSSC4-210ENST00000496468 GZF1Q9H116 711 aaPredicted RBP20.01■□□□□ 0.79
TSSC4-210ENST00000496468 PCIF1Q9H4Z3 704 aa20.01■□□□□ 0.79
TSSC4-210ENST00000496468 PCDHB7Q9Y5E2 793 aa20.01■□□□□ 0.79
TSSC4-210ENST00000496468 SLC4A7Q9Y6M7 1214 aa20.01■□□□□ 0.79
TSSC4-210ENST00000496468 TTC3P53804 2025 aa20■□□□□ 0.79
TSSC4-210ENST00000496468 FAM189A1O60320 539 aa20■□□□□ 0.79
TSSC4-210ENST00000496468 RECQL4O94761 1208 aa20■□□□□ 0.79
TSSC4-210ENST00000496468 EOMESO95936 686 aa20■□□□□ 0.79
TSSC4-210ENST00000496468 PMS1P54277 932 aaKnown RBP20■□□□□ 0.79
TSSC4-210ENST00000496468 OSTNP61366 133 aa20■□□□□ 0.79
TSSC4-210ENST00000496468 FAM189BP81408 668 aa20■□□□□ 0.79
TSSC4-210ENST00000496468 HSP90AA2PQ14568 343 aaPredicted RBP20■□□□□ 0.79
TSSC4-210ENST00000496468 SEZ6Q53EL9 994 aa20■□□□□ 0.79
TSSC4-210ENST00000496468 C11orf57Q6ZUT1 292 aaPredicted RBP20■□□□□ 0.79
TSSC4-210ENST00000496468 GPD1LQ8N335 351 aa20■□□□□ 0.79
TSSC4-210ENST00000496468 LPPQ93052 612 aa20■□□□□ 0.79
TSSC4-210ENST00000496468 FAM213AQ9BRX8 229 aa20■□□□□ 0.79
TSSC4-210ENST00000496468 SNTG2Q9NY99 539 aa20■□□□□ 0.79
TSSC4-210ENST00000496468 RWDD2AQ9UIY3 292 aa20■□□□□ 0.79
TSSC4-210ENST00000496468 HOXA2O43364 376 aa19.99■□□□□ 0.79
TSSC4-210ENST00000496468 EXTL3O43909 919 aa19.99■□□□□ 0.79
TSSC4-210ENST00000496468 UPP2O95045 317 aa19.99■□□□□ 0.79
TSSC4-210ENST00000496468 LDHAP00338 332 aaKnown RBP19.99■□□□□ 0.79
TSSC4-210ENST00000496468 RPL13P26373 211 aaKnown RBP19.99■□□□□ 0.79
TSSC4-210ENST00000496468 YARSP54577 528 aaKnown RBP19.99■□□□□ 0.79
TSSC4-210ENST00000496468 STX17P56962 302 aa19.99■□□□□ 0.79
TSSC4-210ENST00000496468 MYBPC2Q14324 1141 aa19.99■□□□□ 0.79
TSSC4-210ENST00000496468 SHHQ15465 462 aa19.99■□□□□ 0.79
TSSC4-210ENST00000496468 CT47A1Q5JQC4 288 aaPredicted RBP19.99■□□□□ 0.79
TSSC4-210ENST00000496468 ZBTB41Q5SVQ8 909 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms