RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 KIFC3Q9BVG8 833 aa15.79■□□□□ 0.12
VTI1A-209ENST00000496445 HERC2P3Q9BVR0 1158 aa15.79■□□□□ 0.12
VTI1A-209ENST00000496445 ADAM7Q9H2U9 754 aa15.79■□□□□ 0.12
VTI1A-209ENST00000496445 POLD4Q9HCU8 107 aa15.79■□□□□ 0.12
VTI1A-209ENST00000496445 DDX19AQ9NUU7 478 aaKnown RBP15.79■□□□□ 0.12
VTI1A-209ENST00000496445 KIAA1024Q9UPX6 916 aa15.79■□□□□ 0.12
VTI1A-209ENST00000496445 USP20Q9Y2K6 914 aa15.79■□□□□ 0.12
VTI1A-209ENST00000496445 HCN4Q9Y3Q4 1203 aa15.79■□□□□ 0.12
VTI1A-209ENST00000496445 MYH11P35749 1972 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 KMT2EQ8IZD2 1858 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 PRKCBP05771 671 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 WEE2P0C1S8 567 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 GJB2P29033 226 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 NAMPTP43490 491 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 PDIA5Q14554 519 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 TPRNQ4KMQ1 711 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 KANK3Q6NY19 840 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 TBC1D32Q96NH3 1257 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 KLHL5Q96PQ7 755 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 MMTAG2Q9BU76 263 aaKnown RBP15.78■□□□□ 0.12
VTI1A-209ENST00000496445 C2orf40Q9H1Z8 148 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 POMKQ9H5K3 350 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 DZANK1Q9NVP4 752 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 KLK14Q9P0G3 267 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 STK39Q9UEW8 545 aa15.78■□□□□ 0.12
VTI1A-209ENST00000496445 VWA8A3KMH1 1905 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 MTCL1Q9Y4B5 1905 aaKnown RBP15.77■□□□□ 0.12
VTI1A-209ENST00000496445 E9PMD0 336 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 LAD1O00515 517 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 CNPP09543 421 aaKnown RBP15.77■□□□□ 0.12
VTI1A-209ENST00000496445 SP100P23497 879 aaPredicted RBP15.77■□□□□ 0.12
VTI1A-209ENST00000496445 CDC25AP30304 524 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 PLA2G5P39877 138 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 PRPHP41219 470 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 CLCN4P51793 760 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 ATP2C1P98194 919 aaPredicted RBP15.77■□□□□ 0.12
VTI1A-209ENST00000496445 ITIH3Q06033 890 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 GRIK3Q13003 919 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 RARS2Q5T160 578 aaKnown RBP15.77■□□□□ 0.12
VTI1A-209ENST00000496445 HFE2Q6ZVN8 426 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 KCNK18Q7Z418 384 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 HACE1Q8IYU2 909 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 EDAQ92838 391 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 CXCL16Q9H2A7 254 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 CACNG4Q9UBN1 327 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 PARP2Q9UGN5 583 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 KIF3AQ9Y496 699 aa15.77■□□□□ 0.12
VTI1A-209ENST00000496445 ACKR2O00590 384 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 N4BP3O15049 544 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 URODP06132 367 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 ZXDAP98168 799 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 PRPF4BQ13523 1007 aaKnown RBP15.76■□□□□ 0.11
VTI1A-209ENST00000496445 MAPK6Q16659 721 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 RILPL1Q5EBL4 403 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 EEF1DP3Q658K8 133 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 MCTP1Q6DN14 999 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 KIAA1841Q6NSI8 718 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 DAW1Q8N136 415 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 DEPTORQ8TB45 409 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 NECTIN4Q96NY8 510 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 RUSC1Q9BVN2 902 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 RAB34Q9BZG1 259 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 SNTG2Q9NY99 539 aa15.76■□□□□ 0.11
VTI1A-209ENST00000496445 ARIH1Q9Y4X5 557 aaPredicted RBP15.76■□□□□ 0.11
VTI1A-209ENST00000496445 C2CD4DB7Z1M9 353 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 C2CD2LO14523 706 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 PTGESO14684 152 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 RECQL4O94761 1208 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 LIG1P18858 919 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 PPP2R5AQ15172 486 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 NAB2Q15742 525 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 NT5DC1Q5TFE4 455 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 KIAA0319Q5VV43 1072 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 KRT79Q5XKE5 535 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 CES5AQ6NT32 575 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 DTHD1Q6ZMT9 781 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 PPFIBP1Q86W92 1011 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 TMEM87AQ8NBN3 555 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 KIFAP3Q92845 792 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 B3GALT6Q96L58 329 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 FBXL18Q96ME1 805 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 RPS6KC1Q96S38 1066 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 PAAF1Q9BRP4 392 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 EMILIN2Q9BXX0 1053 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 UPF2Q9HAU5 1272 aaKnown RBP15.75■□□□□ 0.11
VTI1A-209ENST00000496445 MRPL17Q9NRX2 175 aaKnown RBP15.75■□□□□ 0.11
VTI1A-209ENST00000496445 STK24Q9Y6E0 443 aa15.75■□□□□ 0.11
VTI1A-209ENST00000496445 PDCD11Q14690 1871 aaKnown RBP15.75■□□□□ 0.11
VTI1A-209ENST00000496445 USP34Q70CQ2 3546 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 TEX28O15482 410 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 HIP1RO75146 1068 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 KLRC2P26717 231 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 MTHFRP42898 656 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 GLUD2P49448 558 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 DSG1Q02413 1049 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 MAPK7Q13164 816 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 FUT10Q6P4F1 479 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 TMC5Q6UXY8 1006 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 TRIM67Q6ZTA4 783 aa15.74■□□□□ 0.11
VTI1A-209ENST00000496445 CABP7Q86V35 215 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms