RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 ANKEF1Q9NU02 776 aa16.27■□□□□ 0.2
PCCB-219ENST00000494742 FNIP2Q9P278 1114 aa16.27■□□□□ 0.2
PCCB-219ENST00000494742 INO80B-WBP1J3KQ70 363 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 SRFP11831 508 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 SCNN1GP51170 649 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 CYP4A11Q02928 519 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 MBTD1Q05BQ5 628 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 CTTNQ14247 550 aaKnown RBP16.26■□□□□ 0.19
PCCB-219ENST00000494742 ANGPT1Q15389 498 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 AMHR2Q16671 573 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 USP41Q3LFD5 358 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 TPH2Q8IWU9 490 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 SLC44A3Q8N4M1 653 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 SMG7Q92540 1137 aaKnown RBP16.26■□□□□ 0.19
PCCB-219ENST00000494742 ZFP42Q96MM3 310 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 HSD17B14Q9BPX1 270 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 MIOSQ9NXC5 875 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 PCDHA12Q9UN75 941 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 HES2Q9Y543 173 aa16.26■□□□□ 0.19
PCCB-219ENST00000494742 PTPRZ1P23471 2315 aaPredicted RBP16.25■□□□□ 0.19
PCCB-219ENST00000494742 RIF1Q5UIP0 2472 aaKnown RBP16.25■□□□□ 0.19
PCCB-219ENST00000494742 FAM186AA6NE01 2351 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 ZBTB39O15060 712 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 XRCC6P12956 609 aaKnown RBP eCLIP16.25■□□□□ 0.19
PCCB-219ENST00000494742 ARF4P18085 180 aaPredicted RBP16.25■□□□□ 0.19
PCCB-219ENST00000494742 ARL2P36404 184 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 GRIK3Q13003 919 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 CAPSQ13938 189 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 FUT10Q6P4F1 479 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 SLC27A1Q6PCB7 646 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 LILRA6Q6PI73 481 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 GSTCDQ8NEC7 633 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 OXER1Q8TDS5 423 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 ZNF707Q96C28 371 aaPredicted RBP16.25■□□□□ 0.19
PCCB-219ENST00000494742 CPB2Q96IY4 423 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 EIF2AK1Q9BQI3 630 aaKnown RBP16.25■□□□□ 0.19
PCCB-219ENST00000494742 NT5C3AQ9H0P0 336 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 PIDD1Q9HB75 910 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 DAXXQ9UER7 740 aaPredicted RBP16.25■□□□□ 0.19
PCCB-219ENST00000494742 ADAM28Q9UKQ2 775 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 ZFP37Q9Y6Q3 630 aaPredicted RBP16.25■□□□□ 0.19
PCCB-219ENST00000494742 SPTBN4Q9H254 2564 aa16.25■□□□□ 0.19
PCCB-219ENST00000494742 DMDP11532 3685 aa16.24■□□□□ 0.19
PCCB-219ENST00000494742 DOCK8Q8NF50 2099 aa16.24■□□□□ 0.19
PCCB-219ENST00000494742 A0A1B0GUA9 196 aa16.24■□□□□ 0.19
PCCB-219ENST00000494742 TGM5O43548 720 aa16.24■□□□□ 0.19
PCCB-219ENST00000494742 NARSO43776 548 aaKnown RBP16.24■□□□□ 0.19
PCCB-219ENST00000494742 PFKFB2O60825 505 aa16.24■□□□□ 0.19
PCCB-219ENST00000494742 RFPL2O75678 378 aa16.24■□□□□ 0.19
PCCB-219ENST00000494742 LAMP2P13473 410 aa16.24■□□□□ 0.19
PCCB-219ENST00000494742 PHLDB3Q6NSJ2 640 aa16.24■□□□□ 0.19
PCCB-219ENST00000494742 ERMP1Q7Z2K6 904 aa16.24■□□□□ 0.19
PCCB-219ENST00000494742 MYADMQ96S97 322 aa16.24■□□□□ 0.19
PCCB-219ENST00000494742 PRKD2Q9BZL6 878 aa16.24■□□□□ 0.19
PCCB-219ENST00000494742 NXF3Q9H4D5 531 aaKnown RBP16.24■□□□□ 0.19
PCCB-219ENST00000494742 BRMS1Q9HCU9 246 aa16.24■□□□□ 0.19
PCCB-219ENST00000494742 KRBA1A5PL33 1030 aa16.23■□□□□ 0.19
PCCB-219ENST00000494742 ANHXE9PGG2 379 aa16.23■□□□□ 0.19
PCCB-219ENST00000494742 CFHP08603 1231 aa16.23■□□□□ 0.19
PCCB-219ENST00000494742 GLRA2P23416 452 aa16.23■□□□□ 0.19
PCCB-219ENST00000494742 KRT2P35908 639 aa16.23■□□□□ 0.19
PCCB-219ENST00000494742 PALB2Q86YC2 1186 aa16.23■□□□□ 0.19
PCCB-219ENST00000494742 ADSSL1Q8N142 457 aa16.23■□□□□ 0.19
PCCB-219ENST00000494742 ASAP3Q8TDY4 903 aa16.23■□□□□ 0.19
PCCB-219ENST00000494742 RSAD2Q8WXG1 361 aa16.23■□□□□ 0.19
PCCB-219ENST00000494742 PRIMPOLQ96LW4 560 aa16.23■□□□□ 0.19
PCCB-219ENST00000494742 CCDC43Q96MW1 224 aaKnown RBP16.23■□□□□ 0.19
PCCB-219ENST00000494742 GPR62Q9BZJ7 368 aa16.23■□□□□ 0.19
PCCB-219ENST00000494742 GJB4Q9NTQ9 266 aa16.23■□□□□ 0.19
PCCB-219ENST00000494742 SF3B1O75533 1304 aaKnown RBP eCLIP16.22■□□□□ 0.192e-6■■■■■ 95.7
PCCB-219ENST00000494742 VPS13AQ96RL7 3174 aa16.22■□□□□ 0.19
PCCB-219ENST00000494742 F8W810 466 aa16.22■□□□□ 0.19
PCCB-219ENST00000494742 STK25O00506 426 aa16.22■□□□□ 0.19
PCCB-219ENST00000494742 ZMYND10O75800 440 aa16.22■□□□□ 0.19
PCCB-219ENST00000494742 SPATA31D3P0C874 917 aa16.22■□□□□ 0.19
PCCB-219ENST00000494742 RFX1P22670 979 aa16.22■□□□□ 0.19
PCCB-219ENST00000494742 RARRES1P49788 294 aa16.22■□□□□ 0.19
PCCB-219ENST00000494742 ANKRD1Q15327 319 aa16.22■□□□□ 0.19
PCCB-219ENST00000494742 CALCRLQ16602 461 aa16.22■□□□□ 0.19
PCCB-219ENST00000494742 EARS2Q5JPH6 523 aaKnown RBP16.22■□□□□ 0.19
PCCB-219ENST00000494742 PPP4R3CPQ6ZMV5 832 aa16.22■□□□□ 0.19
PCCB-219ENST00000494742 SPATA31D4Q6ZUB0 917 aa16.22■□□□□ 0.19
PCCB-219ENST00000494742 RIN2Q8WYP3 895 aaPredicted RBP16.22■□□□□ 0.19
PCCB-219ENST00000494742 TNFRSF25Q93038 417 aa16.22■□□□□ 0.19
PCCB-219ENST00000494742 APOL6Q9BWW8 343 aa16.22■□□□□ 0.19
PCCB-219ENST00000494742 TTC12Q9H892 705 aaPredicted RBP16.22■□□□□ 0.19
PCCB-219ENST00000494742 SLC2A4RGQ9NR83 387 aa16.22■□□□□ 0.19
PCCB-219ENST00000494742 ORC3Q9UBD5 711 aaPredicted RBP16.22■□□□□ 0.19
PCCB-219ENST00000494742 TADA2AO75478 443 aa16.21■□□□□ 0.19
PCCB-219ENST00000494742 NPTXRO95502 500 aa16.21■□□□□ 0.19
PCCB-219ENST00000494742 HNRNPA1P09651 372 aaKnown RBP eCLIP16.21■□□□□ 0.19
PCCB-219ENST00000494742 AKAP5P24588 427 aa16.21■□□□□ 0.19
PCCB-219ENST00000494742 NR5A1Q13285 461 aa16.21■□□□□ 0.19
PCCB-219ENST00000494742 HTR4Q13639 388 aa16.21■□□□□ 0.19
PCCB-219ENST00000494742 HSP90AA2PQ14568 343 aaPredicted RBP16.21■□□□□ 0.19
PCCB-219ENST00000494742 POLR3FQ9H1D9 316 aaPredicted RBP16.21■□□□□ 0.19
PCCB-219ENST00000494742 TBC1D17Q9HA65 648 aa16.21■□□□□ 0.19
PCCB-219ENST00000494742 PRMT7Q9NVM4 692 aaPredicted RBP16.21■□□□□ 0.19
PCCB-219ENST00000494742 TPCN1Q9ULQ1 816 aa16.21■□□□□ 0.19
PCCB-219ENST00000494742 B4GALT5O43286 388 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms