RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 RIN2Q8WYP3 895 aaPredicted RBP3.59□□□□□ -1.83
LRIF1-203ENST00000494675 COA7Q96BR5 231 aa3.59□□□□□ -1.83
LRIF1-203ENST00000494675 ZNF341Q9BYN7 854 aa3.59□□□□□ -1.83
LRIF1-203ENST00000494675 C14orf93Q9H972 538 aaKnown RBP3.59□□□□□ -1.83
LRIF1-203ENST00000494675 SEC61A2Q9H9S3 476 aa3.59□□□□□ -1.83
LRIF1-203ENST00000494675 GOLGA6AQ9NYA3 693 aa3.59□□□□□ -1.83
LRIF1-203ENST00000494675 NR2E1Q9Y466 385 aa3.59□□□□□ -1.83
LRIF1-203ENST00000494675 CTDP1Q9Y5B0 961 aaPredicted RBP3.59□□□□□ -1.83
LRIF1-203ENST00000494675 C2orf78A6NCI8 922 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 PHF2O75151 1096 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 TMEM127O75204 238 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 ALDH1A2O94788 518 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 TOX4O94842 621 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 ATF3P18847 181 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 AKAP5P24588 427 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 ADSLP30566 484 aaPredicted RBP3.58□□□□□ -1.84
LRIF1-203ENST00000494675 ACVRL1P37023 503 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 KIR2DL3P43628 341 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 ATP2C1P98194 919 aaPredicted RBP3.58□□□□□ -1.84
LRIF1-203ENST00000494675 CDSNQ15517 529 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 RRP12Q5JTH9 1297 aaKnown RBP3.58□□□□□ -1.84
LRIF1-203ENST00000494675 GJC2Q5T442 439 aaPredicted RBP3.58□□□□□ -1.84
LRIF1-203ENST00000494675 IFIT1BQ5T764 474 aaKnown RBP3.58□□□□□ -1.84
LRIF1-203ENST00000494675 CXorf57Q6NSI4 855 aaKnown RBP3.58□□□□□ -1.84
LRIF1-203ENST00000494675 ZNF585AQ6P3V2 769 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 ABHD15Q6UXT9 468 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 NOL8Q76FK4 1167 aaKnown RBP3.58□□□□□ -1.84
LRIF1-203ENST00000494675 MAGEB6Q8N7X4 407 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 PIK3C3Q8NEB9 887 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 SNX33Q8WV41 574 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 NRG4Q8WWG1 115 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 DPF2Q92785 391 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 SLC7A6OSQ96CW6 309 aaPredicted RBP3.58□□□□□ -1.84
LRIF1-203ENST00000494675 CLIP3Q96DZ5 547 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 CD248Q9HCU0 757 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 TLR9Q9NR96 1032 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 SCOCQ9UIL1 159 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 SERPINB13Q9UIV8 391 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 SLC4A7Q9Y6M7 1214 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 CCDC154A6NI56 674 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 GPR42O15529 346 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 ARHGAP6O43182 974 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 PRPF3O43395 683 aaKnown RBP3.58□□□□□ -1.84
LRIF1-203ENST00000494675 OFD1O75665 1012 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 ECHS1P30084 290 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 PER3P56645 1201 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 BPIFB4P59827 614 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 RAC3P60763 192 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 PPP3CAQ08209 521 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 MINDY4Q4G0A6 757 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 CCDC181Q5TID7 509 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 MIGA2Q7L4E1 593 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 TAS1R1Q7RTX1 841 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 CATIPQ7Z7H3 387 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 C14orf80Q86SX3 495 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 ZFPM1Q8IX07 1006 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 PALM2Q8IXS6 379 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 ANKRD53Q8N9V6 530 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 DNERQ8NFT8 737 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 HDAC10Q969S8 669 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 RPL10LQ96L21 214 aaKnown RBP3.58□□□□□ -1.84
LRIF1-203ENST00000494675 AIFM3Q96NN9 605 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 C7orf25Q9BPX7 421 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 SLC6A15Q9H2J7 730 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 ING3Q9NXR8 418 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 LIMCH1Q9UPQ0 1083 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 TESMINQ9Y4I5 508 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 HS3ST3A1Q9Y663 406 aa3.58□□□□□ -1.84
LRIF1-203ENST00000494675 FAM171A2A8MVW0 826 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 AP1G1O43747 822 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 DTNBO60941 627 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 CNOT4O95628 575 aaKnown RBP3.57□□□□□ -1.84
LRIF1-203ENST00000494675 JUNP05412 331 aaKnown RBP3.57□□□□□ -1.84
LRIF1-203ENST00000494675 POU2F2P09086 479 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 HSPA6P17066 643 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 PDCP20941 246 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 ADCY7P51828 1080 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 KRTAP10-9P60411 292 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 MGAT2Q10469 447 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 ACAP1Q15027 740 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 TBR1Q16650 682 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 RNF151Q2KHN1 245 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 GFOD2Q3B7J2 385 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 C19orf54Q5BKX5 351 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 RHOT1Q8IXI2 618 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 MSL3Q8N5Y2 521 aaKnown RBP3.57□□□□□ -1.84
LRIF1-203ENST00000494675 C8orf48Q96LL4 319 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 UHRF1Q96T88 793 aaPredicted RBP3.57□□□□□ -1.84
LRIF1-203ENST00000494675 C12orf65Q9H3J6 166 aaKnown RBP3.57□□□□□ -1.84
LRIF1-203ENST00000494675 NMRK2Q9NPI5 230 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 NCDNQ9UBB6 729 aa3.57□□□□□ -1.84
LRIF1-203ENST00000494675 PUF60Q9UHX1 559 aaKnown RBP3.57□□□□□ -1.84
LRIF1-203ENST00000494675 HTRA2O43464 458 aaPredicted RBP3.56□□□□□ -1.84
LRIF1-203ENST00000494675 ENDOD1O94919 500 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 RPLP2P05387 115 aaKnown RBP3.56□□□□□ -1.84
LRIF1-203ENST00000494675 TGM1P22735 817 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 WASP42768 502 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 WNT3AP56704 352 aa3.56□□□□□ -1.84
LRIF1-203ENST00000494675 KRTAP10-7P60409 375 aaPredicted RBP3.56□□□□□ -1.84
LRIF1-203ENST00000494675 HGFACQ04756 655 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms