RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 HOXC13P31276 330 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 RAB27AP51159 221 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 GAS6Q14393 721 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 GRM2Q14416 872 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 IMMTQ16891 758 aaKnown RBP7.69□□□□□ -1.18
FN1-225ENST00000494446 COL28A1Q2UY09 1125 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 LIN9Q5TKA1 542 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 TANGO2Q6ICL3 276 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 TCEAL6Q6IPX3 200 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 AGMOQ6ZNB7 445 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 NPAS3Q8IXF0 933 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 SPEM1Q8N4L4 309 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 LINC01465Q8N7H1 131 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 DNASE1L2Q92874 299 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 TCEAL3Q969E4 200 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 LOXL4Q96JB6 756 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 EDEM2Q9BV94 578 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 TRAIPQ9BWF2 469 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 GCOM2Q9BZD3 368 aaPredicted RBP7.69□□□□□ -1.18
FN1-225ENST00000494446 RSAD1Q9HA92 442 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 SENP2Q9HC62 589 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.69□□□□□ -1.18
FN1-225ENST00000494446 HCFC1R1Q9NWW0 138 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 KANSL3Q9P2N6 904 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 CEP131Q9UPN4 1083 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 PCDHB2Q9Y5E7 798 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 CACNA1EQ15878 2313 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 FREM2Q5SZK8 3169 aa7.69□□□□□ -1.18
FN1-225ENST00000494446 KALRNO60229 2985 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 ADAMTS9Q9P2N4 1935 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 A0A087WZ62 844 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 TTLL13PA6NNM8 815 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 IFIT3O14879 490 aaKnown RBP7.68□□□□□ -1.18
FN1-225ENST00000494446 HYAL3O43820 417 aaPredicted RBP7.68□□□□□ -1.18
FN1-225ENST00000494446 ZNF623O75123 536 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 CHRNB1P11230 501 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 SFPQP23246 707 aaKnown RBP eCLIP7.68□□□□□ -1.18
FN1-225ENST00000494446 ZNF76P36508 570 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 MPLP40238 635 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 HNRNPUQ00839 825 aaKnown RBP eCLIP7.68□□□□□ -1.18
FN1-225ENST00000494446 PABPC1LQ4VXU2 614 aaKnown RBP7.68□□□□□ -1.18
FN1-225ENST00000494446 PLA2G2CQ5R387 149 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 DAB2IPQ5VWQ8 1189 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 CATSPER4Q7RTX7 472 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 CACNA2D4Q7Z3S7 1137 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 KBTBD6Q86V97 674 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 WDR5BQ86VZ2 330 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 COLGALT2Q8IYK4 626 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 RNF168Q8IYW5 571 aaPredicted RBP7.68□□□□□ -1.18
FN1-225ENST00000494446 ADAM32Q8TC27 787 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 PGBD1Q96JS3 809 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 BBC3Q96PG8 261 aaPredicted RBP7.68□□□□□ -1.18
FN1-225ENST00000494446 FDXACB1Q9BRP7 624 aaPredicted RBP7.68□□□□□ -1.18
FN1-225ENST00000494446 LY9Q9HBG7 655 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 VPS45Q9NRW7 570 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 CHST7Q9NS84 486 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 RBM12Q9NTZ6 932 aaKnown RBP7.68□□□□□ -1.18
FN1-225ENST00000494446 FNIP2Q9P278 1114 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 GABBR1Q9UBS5 961 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 TCEAL9Q9UHQ7 104 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 MRPS23Q9Y3D9 190 aaKnown RBP7.68□□□□□ -1.18
FN1-225ENST00000494446 GPSM3Q9Y4H4 160 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 NEUROG3Q9Y4Z2 214 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 MAFBQ9Y5Q3 323 aaPredicted RBP7.68□□□□□ -1.18
FN1-225ENST00000494446 PIAS3Q9Y6X2 628 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 HECTD1Q9ULT8 2610 aa7.68□□□□□ -1.18
FN1-225ENST00000494446 ERICH2A1L162 156 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 NR1I2O75469 434 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 RPP40O75818 363 aaKnown RBP7.67□□□□□ -1.18
FN1-225ENST00000494446 EFEMP2O95967 443 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 C8AP07357 584 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 CCDC192P0DO97 292 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 CEACAM1P13688 526 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 CCNE1P24864 410 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 GDI1P31150 447 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 RAP1GAPP47736 663 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 PXNP49023 591 aaPredicted RBP7.67□□□□□ -1.18
FN1-225ENST00000494446 CREMQ03060 361 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 TROAPQ12815 778 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 USP41Q3LFD5 358 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 CEP55Q53EZ4 464 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 PRSS55Q6UWB4 352 aaPredicted RBP7.67□□□□□ -1.18
FN1-225ENST00000494446 CATIPQ7Z7H3 387 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 GAB3Q8WWW8 586 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 RILPL2Q969X0 211 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 ELSPBP1Q96BH3 223 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 MBOAT7Q96N66 472 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 MKNK1Q9BUB5 465 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 TRMT61BQ9BVS5 477 aaKnown RBP7.67□□□□□ -1.18
FN1-225ENST00000494446 COLEC11Q9BWP8 271 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 SPZ1Q9BXG8 430 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 GPR62Q9BZJ7 368 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 C2orf42Q9NWW7 574 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 DNMT3BQ9UBC3 853 aaKnown RBP7.67□□□□□ -1.18
FN1-225ENST00000494446 FBXW11Q9UKB1 542 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 KLK13Q9UKR3 277 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 MSRB2Q9Y3D2 182 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 CNTNAP2Q9UHC6 1331 aa7.67□□□□□ -1.18
FN1-225ENST00000494446 CFAP46Q8IYW2 2715 aa7.66□□□□□ -1.18
FN1-225ENST00000494446 PLXNB3Q9ULL4 1909 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms