RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 SCLYQ96I15 445 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 RHOVQ96L33 236 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 SPATA33Q96N06 139 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 ALG1Q9BT22 464 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 WNT8AQ9H1J5 351 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 PSTPIP2Q9H939 334 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 MLXIPQ9HAP2 919 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 METTL5Q9NRN9 209 aaKnown RBP9.27□□□□□ -0.93
RIF1-211ENST00000494333 STXBP5LQ9Y2K9 1186 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 SZT2Q5T011 3432 aa9.27□□□□□ -0.93
RIF1-211ENST00000494333 GRXCR1A8MXD5 290 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 STAM2O75886 525 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 PF4P02776 101 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 HMGB1P09429 215 aaKnown RBP9.26□□□□□ -0.93
RIF1-211ENST00000494333 UBA1P22314 1058 aaKnown RBP9.26□□□□□ -0.93
RIF1-211ENST00000494333 USP11P51784 963 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 PTGISQ16647 500 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 RSPO4Q2I0M5 234 aaPredicted RBP9.26□□□□□ -0.93
RIF1-211ENST00000494333 GNPTABQ3T906 1256 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 CDPF1Q6NVV7 123 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 HEATR3Q7Z4Q2 680 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 DEFB128Q7Z7B8 93 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 FAM20CQ8IXL6 584 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 C7orf31Q8N865 590 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 SLC17A8Q8NDX2 589 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 HERVK_113Q902F9 699 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 GUCD1Q96NT3 240 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 FANCD2OSQ96PS1 177 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 MIR1-1HGQ9H1L0 117 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 TTYH1Q9H313 450 aaPredicted RBP9.26□□□□□ -0.93
RIF1-211ENST00000494333 GSX1Q9H4S2 264 aaPredicted RBP9.26□□□□□ -0.93
RIF1-211ENST00000494333 BCAS3Q9H6U6 928 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 FAM105AQ9NUU6 356 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 RBM28Q9NW13 759 aaKnown RBP9.26□□□□□ -0.93
RIF1-211ENST00000494333 NAP1L2Q9ULW6 460 aaPredicted RBP9.26□□□□□ -0.93
RIF1-211ENST00000494333 LTBP2Q14767 1821 aa9.26□□□□□ -0.93
RIF1-211ENST00000494333 LRRC37A2A6NM11 1700 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 KLF18A0A0U1RQI7 1052 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 DHX15O43143 795 aaKnown RBP9.25□□□□□ -0.93
RIF1-211ENST00000494333 ZBTB43O43298 467 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 FURINP09958 794 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 IQCF3P0C7M6 154 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 ZNF286BP0CG31 522 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 CPA1P15085 419 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 ICAM3P32942 547 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 HSPA4P34932 840 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 ASPAP45381 313 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 LMNB2Q03252 620 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 BFSP2Q13515 415 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 CAMK2GQ13555 558 aaPredicted RBP9.25□□□□□ -0.93
RIF1-211ENST00000494333 NEDD9Q14511 834 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 KIAA0753Q2KHM9 967 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.25□□□□□ -0.93
RIF1-211ENST00000494333 PRR23CQ6ZRP0 262 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 CYFIP1Q7L576 1253 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 SESTD1Q86VW0 696 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 RNF34Q969K3 372 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 JAKMIP1Q96N16 626 aaKnown RBP9.25□□□□□ -0.93
RIF1-211ENST00000494333 INPP4AQ96PE3 977 aaPredicted RBP9.25□□□□□ -0.93
RIF1-211ENST00000494333 CDX2Q99626 313 aaPredicted RBP9.25□□□□□ -0.93
RIF1-211ENST00000494333 KATNAL1Q9BW62 490 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 MTIF3Q9H2K0 278 aaKnown RBP9.25□□□□□ -0.93
RIF1-211ENST00000494333 DISC1Q9NRI5 854 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 HDAC6Q9UBN7 1215 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 GTF2IRD1Q9UHL9 959 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 HIF3AQ9Y2N7 669 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 SNX14Q9Y5W7 946 aa9.25□□□□□ -0.93
RIF1-211ENST00000494333 GOLGA8AA7E2F4 631 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 GOLGA8BA8MQT2 603 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 HAS3O00219 553 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 NOP56O00567 594 aaKnown RBP9.24□□□□□ -0.93
RIF1-211ENST00000494333 FIBPO43427 364 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 REC8O95072 547 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 F2P00734 622 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 H2AFB1P0C5Y9 115 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 H2AFB2P0C5Z0 115 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 INPP5AQ14642 412 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 UBE2SQ16763 222 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 XRRA1Q6P2D8 792 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 BLOC1S2Q6QNY1 142 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 Q6ZUG5 572 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 NLRX1Q86UT6 975 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 TRIM42Q8IWZ5 723 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 FBLIM1Q8WUP2 373 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 TIFAQ96CG3 184 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 VWCEQ96DN2 955 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 C16orf70Q9BSU1 422 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 FTOQ9C0B1 505 aaKnown RBP eCLIP9.24□□□□□ -0.93
RIF1-211ENST00000494333 KCNF1Q9H3M0 494 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 ATXN3LQ9H3M9 355 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 PCDHA6Q9UN73 950 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 RAXQ9Y2V3 346 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 PCDHA8Q9Y5H6 950 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 BAZ2BQ9UIF8 2168 aaKnown RBP9.24□□□□□ -0.93
RIF1-211ENST00000494333 FRMPD4Q14CM0 1322 aa9.24□□□□□ -0.93
RIF1-211ENST00000494333 TMEM265A0A087WTH1 108 aa9.23□□□□□ -0.93
RIF1-211ENST00000494333 SMCO2A6NFE2 343 aa9.23□□□□□ -0.93
RIF1-211ENST00000494333 PFKMP08237 780 aa9.23□□□□□ -0.93
RIF1-211ENST00000494333 PSMA5P28066 241 aa9.23□□□□□ -0.93
RIF1-211ENST00000494333 RFC2P35250 354 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms