RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 PTPRJQ12913 1337 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 HNRNPDLO14979 420 aaKnown RBP13.38□□□□□ -0.27
PHF3-205ENST00000494284 EIF3HO15372 352 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■■■□□ 16.4
PHF3-205ENST00000494284 PGK2P07205 417 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 NR1D1P20393 614 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 MXI1P50539 228 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 ACTR2P61160 394 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 GTF2BQ00403 316 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 DHX9Q08211 1270 aaKnown RBP13.38□□□□□ -0.27
PHF3-205ENST00000494284 BICD1Q96G01 975 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 HAPLN2Q9GZV7 340 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 TBC1D22BQ9NU19 505 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 TCRBV7S2A1N4TA0A589 114 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 GJB1P08034 283 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 FERP16591 822 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 CHRNB2P17787 502 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 DSG3P32926 999 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 NF2P35240 595 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 VGLL4Q14135 290 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 GLE1Q53GS7 698 aaKnown RBP13.38□□□□□ -0.27
PHF3-205ENST00000494284 C4orf19Q8IY42 314 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 SCFD2Q8WU76 684 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 C18orf8Q96DM3 657 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 BTBD7Q9P203 1132 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 SNX24Q9Y343 169 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 STK24Q9Y6E0 443 aa13.38□□□□□ -0.27
PHF3-205ENST00000494284 PARP14Q460N5 1801 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 KCNJ1P48048 391 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 PLTPP55058 493 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 ALS2CLQ60I27 953 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 CCDC125Q86Z20 511 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 AGPAT1Q99943 283 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 JPH1Q9HDC5 661 aaPredicted RBP13.37□□□□□ -0.27
PHF3-205ENST00000494284 DBR1Q9UK59 544 aaKnown RBP13.37□□□□□ -0.27
PHF3-205ENST00000494284 EBAG9O00559 213 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 ATP2C2O75185 946 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 RPS12P25398 132 aaKnown RBP13.37□□□□□ -0.27
PHF3-205ENST00000494284 CCND2P30279 289 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 DMP1Q13316 513 aaPredicted RBP13.37□□□□□ -0.27
PHF3-205ENST00000494284 FAM182AQ5T1J6 154 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 STXBP4Q6ZWJ1 553 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 PPP1R13LQ8WUF5 828 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 ZNF516Q92618 1163 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 PPP1R16BQ96T49 567 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 FAM118BQ9BPY3 351 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 MKNK1Q9BUB5 465 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 POLR3FQ9H1D9 316 aaPredicted RBP13.37□□□□□ -0.27
PHF3-205ENST00000494284 ANKFY1Q9P2R3 1169 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 RNF14Q9UBS8 474 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 TMEM59LQ9UK28 342 aa13.37□□□□□ -0.27
PHF3-205ENST00000494284 GTPBP10A4D1E9 387 aaKnown RBP13.36□□□□□ -0.27
PHF3-205ENST00000494284 E7EVH7 732 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 GJB6O95452 261 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 ZDHHC14Q8IZN3 488 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 MDM1Q8TC05 714 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 BBXQ8WY36 941 aaPredicted RBP13.36□□□□□ -0.27
PHF3-205ENST00000494284 DNAJC17Q9NVM6 304 aaKnown RBP13.36□□□□□ -0.27
PHF3-205ENST00000494284 ALG6Q9Y672 507 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 FAM169AQ9Y6X4 670 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 LAMA3Q16787 3333 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 GOLGA6L10A6NI86 522 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 CSDE1O75534 798 aaKnown RBP13.36□□□□□ -0.27
PHF3-205ENST00000494284 SLCO1A2P46721 670 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 NCKAP1LP55160 1127 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 NLRP11P59045 1033 aaKnown RBP13.36□□□□□ -0.27
PHF3-205ENST00000494284 IFI16Q16666 785 aaKnown RBP13.36□□□□□ -0.27
PHF3-205ENST00000494284 INTS8Q75QN2 995 aaKnown RBP13.36□□□□□ -0.27
PHF3-205ENST00000494284 PACS2Q86VP3 889 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 PASD1Q8IV76 773 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 ANKRD35Q8N283 1001 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 PARD3BQ8TEW8 1205 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 ISCUQ9H1K1 167 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 KCND2Q9NZV8 630 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 SLC9A2Q9UBY0 812 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 NOVA2Q9UNW9 492 aaKnown RBP13.36□□□□□ -0.27
PHF3-205ENST00000494284 STXBP5LQ9Y2K9 1186 aa13.36□□□□□ -0.27
PHF3-205ENST00000494284 KRT5P13647 590 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 LSP1P33241 339 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 LY6KQ17RY6 165 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 CATSPERGQ6ZRH7 1159 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 SV2AQ7L0J3 742 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 CCDC25Q86WR0 208 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 ASAP3Q8TDY4 903 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 EPS8L1Q8TE68 723 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 NSUN6Q8TEA1 469 aaKnown RBP13.35□□□□□ -0.27
PHF3-205ENST00000494284 RFFLQ8WZ73 363 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 OTUD5Q96G74 571 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 PBKQ96KB5 322 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 GPRC5DQ9NZD1 345 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 ZNFX1Q9P2E3 1918 aaKnown RBP13.35□□□□□ -0.27
PHF3-205ENST00000494284 PHIPQ8WWQ0 1821 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 SHOX2O60902 331 aaPredicted RBP13.35□□□□□ -0.27
PHF3-205ENST00000494284 USP2O75604 605 aaPredicted RBP13.35□□□□□ -0.27
PHF3-205ENST00000494284 SHBGP04278 402 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 ZNF844Q08AG5 666 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 PPP2R5AQ15172 486 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 KRT71Q3SY84 523 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 ACTRT1Q8TDG2 376 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 HES6Q96HZ4 224 aa13.35□□□□□ -0.27
PHF3-205ENST00000494284 ATP6V1G3Q96LB4 118 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms