RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 AFPP02771 609 aaKnown RBP13.79□□□□□ -0.2
VPS52-220ENST00000493674 ARF4P18085 180 aaPredicted RBP13.79□□□□□ -0.2
VPS52-220ENST00000493674 EIF4BP23588 611 aaKnown RBP13.79□□□□□ -0.2
VPS52-220ENST00000493674 GJA8P48165 433 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 CDK7P50613 346 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 CLDN10P78369 228 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 CYP24A1Q07973 514 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 TMEM62Q0P6H9 643 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 KCNH2Q12809 1159 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 PTK7Q13308 1070 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 NOLC1Q14978 699 aaKnown RBP eCLIP13.79□□□□□ -0.2
VPS52-220ENST00000493674 SNX17Q15036 470 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 PTGISQ16647 500 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 PTPN21Q16825 1174 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 FAM47CQ5HY64 1035 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 FAM26DQ5JW98 314 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 EEF1DP3Q658K8 133 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 SPC24Q8NBT2 197 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 TMEM40Q8WWA1 233 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 SAAL1Q96ER3 474 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 PPP1R16BQ96T49 567 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 OSMRQ99650 979 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 MSTO1Q9BUK6 570 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 CELF4Q9BZC1 486 aaKnown RBP13.79□□□□□ -0.2
VPS52-220ENST00000493674 TTYH3Q9C0H2 523 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 SENP6Q9GZR1 1112 aaPredicted RBP13.79□□□□□ -0.2
VPS52-220ENST00000493674 PDZD7Q9H5P4 517 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 TRPV2Q9Y5S1 764 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 SCN1AP35498 2009 aa13.79□□□□□ -0.2
VPS52-220ENST00000493674 A0A1B0GUA9 196 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 GOLGA8IPA6NC78 632 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 GOLGA8JA6NMD2 632 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 ARVCFO00192 962 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 OGTO15294 1046 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 CLDN3O15551 220 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 CAND2O75155 1236 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 CSDE1O75534 798 aaKnown RBP13.78□□□□□ -0.2
VPS52-220ENST00000493674 POU5F1Q01860 360 aaKnown RBP13.78□□□□□ -0.2
VPS52-220ENST00000493674 RBL2Q08999 1139 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 FIGNQ5HY92 759 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 DPY19L2P1Q6NXN4 242 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 CREBRFQ8IUR6 639 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 PARD3BQ8TEW8 1205 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 CDT1Q9H211 546 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 STARD7Q9NQZ5 370 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 AGPAT5Q9NUQ2 364 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 ANKFY1Q9P2R3 1169 aa13.78□□□□□ -0.2
VPS52-220ENST00000493674 ZNF233A6NK53 670 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 GOLGA6L6A8MZA4 724 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 CHRNA1P02708 482 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 MYCNP04198 464 aaPredicted RBP13.77□□□□□ -0.21
VPS52-220ENST00000493674 MCF2P10911 925 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 KRT13P13646 458 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 AXLP30530 894 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 HOXA11P31270 313 aaPredicted RBP13.77□□□□□ -0.21
VPS52-220ENST00000493674 FMO5P49326 533 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 VAMP7P51809 220 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 KCNMA1Q12791 1236 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 PSMD6Q15008 389 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 SYCP1Q15431 976 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 HS1BP3Q53T59 392 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 ZBTB41Q5SVQ8 909 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 FKBP15Q5T1M5 1219 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 RSPH3Q86UC2 560 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 BRSK2Q8IWQ3 736 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 DRC7Q8IY82 874 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 ANKLE1Q8NAG6 615 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 U2AF1L4Q8WU68 220 aaKnown RBP13.77□□□□□ -0.21
VPS52-220ENST00000493674 SCLT1Q96NL6 688 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 TRMT13Q9NUP7 481 aaKnown RBP13.77□□□□□ -0.21
VPS52-220ENST00000493674 CPSF3Q9UKF6 684 aaKnown RBP13.77□□□□□ -0.21
VPS52-220ENST00000493674 CDY2AQ9Y6F7 541 aa13.77□□□□□ -0.21
VPS52-220ENST00000493674 P4HA2O15460 535 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 B4GALT4O60513 344 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 ERLIN2O94905 339 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 SGPL1O95470 568 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 GYPCP04921 128 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 TRIM49P0CI25 452 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 TRIM49CP0CI26 452 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 COL6A1P12109 1028 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 SFPQP23246 707 aaKnown RBP eCLIP13.76□□□□□ -0.21
VPS52-220ENST00000493674 GTF2H1P32780 548 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 WNT7BP56706 349 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 GSDMDP57764 484 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 DLG4P78352 724 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 PPP3CAQ08209 521 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 TRIM14Q14142 442 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 ARID5BQ14865 1188 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 ZNF568Q3ZCX4 644 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 DCAF17Q5H9S7 520 aaPredicted RBP13.76□□□□□ -0.21
VPS52-220ENST00000493674 TRAF7Q6Q0C0 670 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 CCDC186Q7Z3E2 898 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 FAM228AQ86W67 206 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 CCDC155Q8N6L0 562 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 RDH13Q8NBN7 331 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 IQCDQ96DY2 449 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 FAM213AQ9BRX8 229 aa13.76□□□□□ -0.21
VPS52-220ENST00000493674 FNDC1Q4ZHG4 1894 aaPredicted RBP13.76□□□□□ -0.21
VPS52-220ENST00000493674 TTC3P53804 2025 aa13.75□□□□□ -0.21
VPS52-220ENST00000493674 PTPRSQ13332 1948 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms