RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 MCF2P10911 925 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 FGFR1P11362 822 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 ATP2A2P16615 1042 aaKnown RBP13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 RAB27AP51159 221 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 NOLC1Q14978 699 aaKnown RBP eCLIP13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 DCAF4L1Q3SXM0 396 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 SEZ6Q53EL9 994 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 COBLL1Q53SF7 1204 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 CLLU1OSQ5K130 101 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 FAM117BQ6P1L5 589 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 AGMOQ6ZNB7 445 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 HERC6Q8IVU3 1022 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 TDHQ8IZJ6 230 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 SYCP3Q8IZU3 236 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 ADSSL1Q8N142 457 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 GUF1Q8N442 669 aaKnown RBP13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 RNF169Q8NCN4 708 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 CBWD1Q9BRT8 395 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 GBP3Q9H0R5 595 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 CXCL16Q9H2A7 254 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 SEMA6BQ9H3T3 888 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 ELAC1Q9H777 363 aaKnown RBP13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 TMEM206Q9H813 350 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 AGPAT3Q9NRZ7 376 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 TMEM161AQ9NX61 479 aa13.25□□□□□ -0.29
RHBDF1-211ENST00000493647 COL4A6Q14031 1691 aa13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 CLDN3O15551 220 aa13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 AKAP5P24588 427 aa13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 PMS1P54277 932 aaKnown RBP13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 ZCWPW2Q504Y3 356 aa13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 THNSL1Q8IYQ7 743 aa13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 TRIML1Q8N9V2 468 aa13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 PHOSPHO2Q8TCD6 241 aa13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 SLC9A7Q96T83 725 aa13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 ADPGKQ9BRR6 497 aa13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 TCHPQ9BT92 498 aa13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 APOL6Q9BWW8 343 aa13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 MTIF3Q9H2K0 278 aaKnown RBP13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 PCIF1Q9H4Z3 704 aa13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 RC3H2Q9HBD1 1191 aaKnown RBP13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 SNTG2Q9NY99 539 aa13.24□□□□□ -0.29
RHBDF1-211ENST00000493647 TTC3P53804 2025 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 PTPRSQ13332 1948 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 CLIC2O15247 247 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 GJB5O95377 273 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 EOMESO95936 686 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 STAG3L1P0CL83 205 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 SKIP12755 728 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 ITGA4P13612 1032 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 GARTP22102 1010 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 TNFSF9P41273 254 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 GRM5P41594 1212 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 MATR3P43243 847 aaKnown RBP eCLIP13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 AFF1P51825 1210 aaKnown RBP13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 RABGGTBP53611 331 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 OSTNP61366 133 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 HTRA4P83105 476 aaPredicted RBP13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 HELQQ8TDG4 1101 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 POMGNT1Q8WZA1 660 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 SAAL1Q96ER3 474 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 MSTO1Q9BUK6 570 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 TRIM6Q9C030 488 aaPredicted RBP13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 TYW1Q9NV66 732 aaKnown RBP13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 PCDHB7Q9Y5E2 793 aa13.23□□□□□ -0.29
RHBDF1-211ENST00000493647 GOLGA8IPA6NC78 632 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 GOLGA8JA6NMD2 632 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 PDXKO00764 312 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 OGTO15294 1046 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 OFD1O75665 1012 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 DGKIO75912 1065 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 RECQL4O94761 1208 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 ARHGEF15O94989 841 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 MYOGP15173 224 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 NLRP12P59046 1061 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 SKOR2Q2VWA4 1001 aaPredicted RBP13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 DPCR1Q3MIW9 517 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 SLFN12LQ6IEE8 588 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 ARMCX5Q6P1M9 558 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 CRELD2Q6UXH1 353 aaPredicted RBP13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 C12orf56Q8IXR9 622 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 ZNF689Q96CS4 500 aaPredicted RBP13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 PGBD4Q96DM1 585 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 ZFP42Q96MM3 310 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 CASD1Q96PB1 797 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 MED15Q96RN5 788 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 GTPBP4Q9BZE4 634 aaKnown RBP13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 RSAD1Q9HA92 442 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 DMAC2Q9NW81 257 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 MIOSQ9NXC5 875 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 HSPBP1Q9NZL4 362 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 KLK14Q9P0G3 267 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 HCSTQ9UBK5 93 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 PARP2Q9UGN5 583 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 CPSF3Q9UKF6 684 aaKnown RBP13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 AGO2Q9UKV8 859 aaKnown RBP13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 LRFN2Q9ULH4 789 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 TRAF3IP3Q9Y228 551 aa13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 YBX2Q9Y2T7 364 aaKnown RBP13.22□□□□□ -0.29
RHBDF1-211ENST00000493647 LCHNA4D1U4 455 aa13.21□□□□□ -0.29
RHBDF1-211ENST00000493647 TRIM49BA6NDI0 452 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms