RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 KCNJ1P48048 391 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 IRX5P78411 483 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-220ENST00000492280 CETN1Q12798 172 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 SF3A3Q12874 501 aaKnown RBP eCLIP13.41□□□□□ -0.266e-7■□□□□ 11.3
HMGN1-220ENST00000492280 PPFIA1Q13136 1202 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 SEPT14Q6ZU15 432 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 SV2AQ7L0J3 742 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 RASGEF1CQ8N431 466 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 KCTD17Q8N5Z5 321 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 ZNF653Q96CK0 615 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 PICK1Q9NRD5 415 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 GGA3Q9NZ52 723 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 SNX24Q9Y343 169 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 PTPRJQ12913 1337 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 RGPD3A6NKT7 1758 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-220ENST00000492280 RGPD4Q7Z3J3 1758 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 GOLGA8KD6RF30 607 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 OPA1O60313 960 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 EDN1P05305 212 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 CFHP08603 1231 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 KRT76Q01546 638 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 NIPA1Q7RTP0 329 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 PASD1Q8IV76 773 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 MAP4K3Q8IVH8 894 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 SCYL3Q8IZE3 742 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 BCAS4Q8TDM0 211 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 FAM118BQ9BPY3 351 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 NUP85Q9BW27 656 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 POLR3FQ9H1D9 316 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-220ENST00000492280 JPH1Q9HDC5 661 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-220ENST00000492280 ANKFY1Q9P2R3 1169 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 ATP8A1Q9Y2Q0 1164 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 PHIPQ8WWQ0 1821 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 ARID2Q68CP9 1835 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 MYO1CO00159 1063 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 CCND2P30279 289 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 NF2P35240 595 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 JAK3P52333 1124 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 SMTNP53814 917 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 ZNF280AP59817 542 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-220ENST00000492280 ACTR2P61160 394 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 CHADLQ6NUI6 762 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 SRLQ86TD4 932 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 REPS2Q8NFH8 660 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 HELQQ8TDG4 1101 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 ATP8B4Q8TF62 1192 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 SLC16A10Q8TF71 515 aa13.41□□□□□ -0.26
HMGN1-220ENST00000492280 DOCK1Q14185 1865 aa13.4□□□□□ -0.26
HMGN1-220ENST00000492280 O00370 1275 aa13.4□□□□□ -0.26
HMGN1-220ENST00000492280 GJB6O95452 261 aa13.4□□□□□ -0.26
HMGN1-220ENST00000492280 MAPTP10636 758 aaKnown RBP13.4□□□□□ -0.26
HMGN1-220ENST00000492280 PYGMP11217 842 aa13.4□□□□□ -0.26
HMGN1-220ENST00000492280 CYP11B1P15538 503 aa13.4□□□□□ -0.26
HMGN1-220ENST00000492280 SEC24CP53992 1094 aa13.4□□□□□ -0.26
HMGN1-220ENST00000492280 NLRP11P59045 1033 aaKnown RBP13.4□□□□□ -0.26
HMGN1-220ENST00000492280 DHX9Q08211 1270 aaKnown RBP13.4□□□□□ -0.26
HMGN1-220ENST00000492280 ALS2CLQ60I27 953 aa13.4□□□□□ -0.26
HMGN1-220ENST00000492280 KRT39Q6A163 491 aa13.4□□□□□ -0.26
HMGN1-220ENST00000492280 TTC27Q6P3X3 843 aa13.4□□□□□ -0.26
HMGN1-220ENST00000492280 TMEM130Q8N3G9 435 aa13.4□□□□□ -0.26
HMGN1-220ENST00000492280 ZNF564Q8TBZ8 553 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-220ENST00000492280 INTUQ9ULD6 942 aa13.4□□□□□ -0.26
HMGN1-220ENST00000492280 TRPC6Q9Y210 931 aa13.4□□□□□ -0.26
HMGN1-220ENST00000492280 SPOPO43791 374 aa13.4□□□□□ -0.27
HMGN1-220ENST00000492280 STBD1O95210 358 aa13.4□□□□□ -0.27
HMGN1-220ENST00000492280 LYPLA2O95372 231 aa13.4□□□□□ -0.27
HMGN1-220ENST00000492280 PLTPP55058 493 aa13.4□□□□□ -0.27
HMGN1-220ENST00000492280 FAM71AQ8IYT1 594 aa13.4□□□□□ -0.27
HMGN1-220ENST00000492280 WHAMMQ8TF30 809 aa13.4□□□□□ -0.27
HMGN1-220ENST00000492280 CPA5Q8WXQ8 436 aa13.4□□□□□ -0.27
HMGN1-220ENST00000492280 ZNF516Q92618 1163 aa13.4□□□□□ -0.27
HMGN1-220ENST00000492280 RUBCNQ92622 972 aa13.4□□□□□ -0.27
HMGN1-220ENST00000492280 CYP39A1Q9NYL5 469 aa13.4□□□□□ -0.27
HMGN1-220ENST00000492280 LCTP09848 1927 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 LRRIQ4A6NIV6 560 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 TTLL13PA6NNM8 815 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 NR1D1P20393 614 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 GJC1P36383 396 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 HSPA9P38646 679 aaKnown RBP13.39□□□□□ -0.27
HMGN1-220ENST00000492280 TGFB2P61812 414 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 DR1Q01658 176 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 POU5F1Q01860 360 aaKnown RBP13.39□□□□□ -0.27
HMGN1-220ENST00000492280 DRP2Q13474 957 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 ZBTB10Q96DT7 871 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 HAPLN2Q9GZV7 340 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 RAB20Q9NX57 234 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 SLC9A2Q9UBY0 812 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 UMODL1Q5DID0 1318 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 MYO1FO00160 1098 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 CCDC172P0C7W6 258 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 ATP4AP20648 1035 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 ANXA13P27216 316 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 TMOD1P28289 359 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 GPC5P78333 572 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 CYP24A1Q07973 514 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 ZNF844Q08AG5 666 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 TREML2Q5T2D2 321 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 FBXL13Q8NEE6 735 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 SHC3Q92529 594 aa13.39□□□□□ -0.27
HMGN1-220ENST00000492280 CALR3Q96L12 384 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms