RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 CSPP1Q1MSJ5 1256 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 TPRNQ4KMQ1 711 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 CNNM4Q6P4Q7 775 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 MPZL3Q6UWV2 235 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ZPBP2Q6X784 338 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 CCDC65Q8IXS2 484 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 FSIP1Q8NA03 581 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 MRPS27Q92552 414 aaKnown RBP17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 BICD1Q96G01 975 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ZNF558Q96NG5 402 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 CDT1Q9H211 546 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ST6GALNAC4Q9H4F1 302 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 PTPRHQ9HD43 1115 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 PANK4Q9NVE7 773 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 KANSL3Q9P2N6 904 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 USP25Q9UHP3 1055 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 SERTAD1Q9UHV2 236 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 MTCH2Q9Y6C9 303 aa17.86■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ARL5CA6NH57 179 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ACTN4O43707 911 aaKnown RBP17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 TOM1L1O75674 476 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 SLFN14P0C7P3 912 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 SYKP43405 635 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 AFF1P51825 1210 aaKnown RBP17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ASIC1P78348 528 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 GTF2BQ00403 316 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 PTPROQ16827 1216 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 HERC4Q5GLZ8 1057 aaPredicted RBP17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 KCNT2Q6UVM3 1135 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 KLHL23Q8NBE8 558 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 MAFAQ8NHW3 353 aaPredicted RBP17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 GAD1Q99259 594 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 C7orf25Q9BPX7 421 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 MRPL44Q9H9J2 332 aaKnown RBP17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 OLFML3Q9NRN5 406 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 SNTG2Q9NY99 539 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 LMCD1Q9NZU5 365 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ANKFY1Q9P2R3 1169 aa17.85■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ABLIM1O14639 778 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 HNRNPDLO14979 420 aaKnown RBP17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 GRM6O15303 877 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ZC3H11AO75152 810 aaKnown RBP eCLIP17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 RECQL4O94761 1208 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 POMCP01189 267 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 PIGRP01833 764 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ITGB1P05556 798 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 MCF2P10911 925 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 PPM1AP35813 382 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 AFMP43652 599 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 LIG4P49917 911 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 SCNN1GP51170 649 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 NDUFA8P51970 172 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 BCAR1P56945 870 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 COASYQ13057 564 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 NOLC1Q14978 699 aaKnown RBP eCLIP17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ZC2HC1CQ53FD0 456 aaPredicted RBP17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ZNF720Q7Z2F6 126 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ZBTB33Q86T24 672 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 MAP4K3Q8IVH8 894 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 THNSL1Q8IYQ7 743 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 MICALL1Q8N3F8 863 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 HVCN1Q96D96 273 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ZBTB45Q96K62 511 aaPredicted RBP17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 ZFP42Q96MM3 310 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 FAM193BQ96PV7 902 aaPredicted RBP17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 RPS6KC1Q96S38 1066 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 TCHPQ9BT92 498 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 GBP3Q9H0R5 595 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 LMAN2LQ9H0V9 348 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 GOLPH3LQ9H4A5 285 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 NRDE2Q9H7Z3 1164 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 KLK14Q9P0G3 267 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 TBC1D7Q9P0N9 293 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 PLAGL2Q9UPG8 496 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 CDH23Q9H251 3354 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 CHD7Q9P2D1 2997 aa17.84■□□□□ 0.45
MSH5-SAPCD1-206ENST00000491552 CARNS1A5YM72 827 aa17.83■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 GOLGA6L4A6NEF3 574 aa17.83■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 PPP1R37O75864 691 aa17.83■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 GCNT3O95395 438 aa17.83■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 HARSP12081 509 aaKnown RBP17.83■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 PBX3P40426 434 aa17.83■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 GRM5P41594 1212 aa17.83■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 MRPL38Q96DV4 380 aaKnown RBP17.83■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 CCDC94Q9BW85 323 aaPredicted RBP17.83■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 BLZF1Q9H2G9 400 aa17.83■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 ALG13Q9NP73 1137 aaKnown RBP17.83■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 MIOSQ9NXC5 875 aa17.83■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 GDAQ9Y2T3 454 aa17.83■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.82■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 CLDN3O15551 220 aa17.82■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 FGF18O76093 207 aa17.82■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 DDHD2O94830 711 aa17.82■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 CASP1P29466 404 aa17.82■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 MATR3P43243 847 aaKnown RBP eCLIP17.82■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 ALDH7A1P49419 539 aaKnown RBP17.82■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 MCL1Q07820 350 aa17.82■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 GRIK3Q13003 919 aa17.82■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 ALCAMQ13740 583 aa17.82■□□□□ 0.44
MSH5-SAPCD1-206ENST00000491552 UNC13DQ70J99 1090 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms