RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 ZNF280AP59817 542 aaPredicted RBP7.87□□□□□ -1.15
NPHP3-208ENST00000490993 GNGT1P63211 74 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 CAV1Q03135 178 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 ZNF699Q32M78 642 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 SLC30A10Q6XR72 485 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 OTUD6BQ8N6M0 293 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 RSAD2Q8WXG1 361 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 HAUS1Q96CS2 278 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 LRRC1Q9BTT6 524 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 ANAPC7Q9UJX3 599 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 F8VZ95 297 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 MYCNP04198 464 aaPredicted RBP7.87□□□□□ -1.15
NPHP3-208ENST00000490993 PRKCBP05771 671 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 GNA15P30679 374 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 WDR59Q6PJI9 974 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 TMEM270Q6UE05 265 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 ERICH1Q86X53 443 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 TPCN2Q8NHX9 752 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 IQCGQ9H095 443 aaKnown RBP7.87□□□□□ -1.15
NPHP3-208ENST00000490993 MROH8Q9H579 483 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 KCNK9Q9NPC2 374 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 CACNA1SQ13698 1873 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 ZNF831Q5JPB2 1677 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 BTNL10A8MVZ5 291 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 TXNP10599 105 aaKnown RBP7.87□□□□□ -1.15
NPHP3-208ENST00000490993 GZMAP12544 262 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 PRKCIP41743 596 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 DHX9Q08211 1270 aaKnown RBP7.87□□□□□ -1.15
NPHP3-208ENST00000490993 ARSHQ5FYA8 562 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 MUM1L1Q5H9M0 696 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 CATSPERGQ6ZRH7 1159 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 USP38Q8NB14 1042 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 IP6K2Q9UHH9 426 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 PCDHB2Q9Y5E7 798 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 MYH13Q9UKX3 1938 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 IL18RAPO95256 599 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 TAL1P17542 331 aaPredicted RBP7.86□□□□□ -1.15
NPHP3-208ENST00000490993 PHBP35232 272 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 SLC26A2P50443 739 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 PRAMEF18Q5VWM3 479 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 RSPH3Q86UC2 560 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 VSIG10LQ86VR7 867 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 RHPN2Q8IUC4 686 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 TMEM143Q96AN5 459 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 CNOT10Q9H9A5 744 aaKnown RBP7.86□□□□□ -1.15
NPHP3-208ENST00000490993 DOCK2Q92608 1830 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 FRMD3A2A2Y4 597 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 ADAMTS3O15072 1205 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 HBP1O60381 514 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 IBSPP21815 317 aaPredicted RBP7.86□□□□□ -1.15
NPHP3-208ENST00000490993 APTXQ7Z2E3 356 aaKnown RBP7.86□□□□□ -1.15
NPHP3-208ENST00000490993 ST7Q9NRC1 585 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 RAB21Q9UL25 225 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 SCAF8Q9UPN6 1271 aaKnown RBP7.86□□□□□ -1.15
NPHP3-208ENST00000490993 ASTN1O14525 1302 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 GH1P01241 217 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 KRT1P04264 644 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 EZRP15311 586 aaKnown RBP7.86□□□□□ -1.15
NPHP3-208ENST00000490993 PLTPP55058 493 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 KRT81Q14533 505 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 SGSM1Q2NKQ1 1148 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 MEI1Q5TIA1 1274 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 SYDE1Q6ZW31 735 aaPredicted RBP7.86□□□□□ -1.15
NPHP3-208ENST00000490993 ZNF571Q7Z3V5 609 aaPredicted RBP7.86□□□□□ -1.15
NPHP3-208ENST00000490993 THNSL1Q8IYQ7 743 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 NOA1Q8NC60 698 aaKnown RBP7.86□□□□□ -1.15
NPHP3-208ENST00000490993 PROCA1Q8NCQ7 364 aaPredicted RBP7.86□□□□□ -1.15
NPHP3-208ENST00000490993 SCFD2Q8WU76 684 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 BAP1Q92560 729 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 RNPC3Q96LT9 517 aaKnown RBP7.86□□□□□ -1.15
NPHP3-208ENST00000490993 PARVAQ9NVD7 372 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 NXF1Q9UBU9 619 aaKnown RBP7.86□□□□□ -1.15
NPHP3-208ENST00000490993 ZNF148Q9UQR1 794 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 CAPN6Q9Y6Q1 641 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 CHD4Q14839 1912 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 IGLV3-22A0A075B6J6 115 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 TJP3O95049 919 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 GTF2BQ00403 316 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 KCNMA1Q12791 1236 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 PNMA8AQ86V59 439 aaPredicted RBP7.86□□□□□ -1.15
NPHP3-208ENST00000490993 RNF149Q8NC42 400 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 MED15Q96RN5 788 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 RPS6KC1Q96S38 1066 aa7.86□□□□□ -1.15
NPHP3-208ENST00000490993 PACSIN2Q9UNF0 486 aaPredicted RBP7.86□□□□□ -1.15
NPHP3-208ENST00000490993 SLURP2P0DP57 97 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 CETPP11597 493 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 CD58P19256 250 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 PPATQ06203 517 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 LAMC2Q13753 1193 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 ZCWPW2Q504Y3 356 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 SLC51AQ86UW1 340 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 MAP4K3Q8IVH8 894 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 RHOT1Q8IXI2 618 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 C12orf56Q8IXR9 622 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 ACTRT1Q8TDG2 376 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 C7orf43Q8WVR3 580 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 CBWD1Q9BRT8 395 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 CARD9Q9H257 536 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 GANQ9H2C0 597 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 DDX56Q9NY93 547 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms