RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 DDX4Q9NQI0 724 aaKnown RBP10.89□□□□□ -0.67
BRD9-209ENST00000490814 A0A1B0GUL6 1792 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 A8MUI8 341 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 hCG_1984214I3L0E3 225 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 IGF2BP3O00425 579 aaKnown RBP eCLIP10.89□□□□□ -0.67
BRD9-209ENST00000490814 SESN3P58005 492 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 PRKG1Q13976 671 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 TAF11Q15544 211 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 ZNF746Q6NUN9 644 aaPredicted RBP10.89□□□□□ -0.67
BRD9-209ENST00000490814 DPY19L2Q6NUT2 758 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 ZNF713Q8N859 430 aaPredicted RBP10.89□□□□□ -0.67
BRD9-209ENST00000490814 CYP2W1Q8TAV3 490 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 SLC35G2Q8TBE7 412 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 KCNK9Q9NPC2 374 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 ATXN10Q9UBB4 475 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 WDR37Q9Y2I8 494 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 ROBO3Q96MS0 1386 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 IPO5O00410 1097 aaKnown RBP10.89□□□□□ -0.67
BRD9-209ENST00000490814 DDX3XO00571 662 aaKnown RBP eCLIP10.89□□□□□ -0.676e-6■■□□□ 14.5
BRD9-209ENST00000490814 DR1Q01658 176 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 RIPK1Q13546 671 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 DRAP1Q14919 205 aaPredicted RBP10.89□□□□□ -0.67
BRD9-209ENST00000490814 SLFN13Q68D06 897 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 AADACL2Q6P093 401 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 OTUD6AQ7L8S5 288 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 ANKRD42Q8N9B4 389 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 SGIP1Q9BQI5 828 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 FAM114A2Q9NRY5 505 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 DNAJC12Q9UKB3 198 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 RABGAP1Q9Y3P9 1069 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 DAAM1Q9Y4D1 1078 aa10.89□□□□□ -0.67
BRD9-209ENST00000490814 DDNO94850 711 aaPredicted RBP10.88□□□□□ -0.67
BRD9-209ENST00000490814 ALDH5A1P51649 535 aaPredicted RBP10.88□□□□□ -0.67
BRD9-209ENST00000490814 LACTBP83111 547 aaPredicted RBP10.88□□□□□ -0.67
BRD9-209ENST00000490814 GIT2Q14161 759 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 GPATCH4Q5T3I0 446 aaKnown RBP10.88□□□□□ -0.67
BRD9-209ENST00000490814 HS2ST1Q7LGA3 356 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 SP8Q8IXZ3 490 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 GBP7Q8N8V2 638 aaPredicted RBP10.88□□□□□ -0.67
BRD9-209ENST00000490814 SCFD2Q8WU76 684 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.88□□□□□ -0.67
BRD9-209ENST00000490814 TEKT1Q969V4 418 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 RUSC1Q9BVN2 902 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 DBR1Q9UK59 544 aaKnown RBP10.88□□□□□ -0.67
BRD9-209ENST00000490814 PPP1R9AQ9ULJ8 1098 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 AGAP1Q9UPQ3 857 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 CCDC188H7C350 402 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 DDX39AO00148 427 aaKnown RBP10.88□□□□□ -0.67
BRD9-209ENST00000490814 ZBTB39O15060 712 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 PFDN1O60925 122 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 GDF11O95390 407 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 NQO1P15559 274 aaKnown RBP10.88□□□□□ -0.67
BRD9-209ENST00000490814 COG2Q14746 738 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 DHRS1Q96LJ7 313 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 RHBDL2Q9NX52 303 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 ASB3Q9Y575 518 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 MYH7BA7E2Y1 1941 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 CCDC169A6NNP5 214 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 MAP3K13O43283 966 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 ATP2B4P23634 1241 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 MRPS35P82673 323 aaKnown RBP10.88□□□□□ -0.67
BRD9-209ENST00000490814 ATP11AP98196 1134 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 EDRF1Q3B7T1 1238 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 CRY2Q49AN0 593 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 ANKRD20A2Q5SQ80 823 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 C10orf76Q5T2E6 689 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 ANKRD20A1Q5TYW2 823 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 ANKRD20A3Q5VUR7 823 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 STYK1Q6J9G0 422 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 ZNF280DQ6N043 979 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 PPP4R3CPQ6ZMV5 832 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 FRMD5Q7Z6J6 570 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 LMNTD2Q8IXW0 634 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 SLFN12Q8IYM2 578 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 OGFOD1Q8N543 542 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 ACTRT1Q8TDG2 376 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 PCIF1Q9H4Z3 704 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 ZNF408Q9H9D4 720 aa10.88□□□□□ -0.67
BRD9-209ENST00000490814 DNAJC17Q9NVM6 304 aaKnown RBP10.88□□□□□ -0.67
BRD9-209ENST00000490814 PAIP2BQ9ULR5 123 aaKnown RBP10.88□□□□□ -0.67
BRD9-209ENST00000490814 CFAP73A6NFT4 308 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 EXOC3O60645 756 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 CFBP00751 764 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 EEF2P13639 858 aaKnown RBP10.87□□□□□ -0.67
BRD9-209ENST00000490814 SMARCA1P28370 1054 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 PMS2P54278 862 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 ADCY1Q08828 1119 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 NFIAQ12857 509 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 SLC29A2Q14542 456 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 MESDQ14696 234 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 ERICH1Q86X53 443 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 NEK9Q8TD19 979 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 NAF1Q96HR8 494 aaKnown RBP10.87□□□□□ -0.67
BRD9-209ENST00000490814 TRAIPQ9BWF2 469 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 RAB17Q9H0T7 212 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 METTL14Q9HCE5 456 aaKnown RBP10.87□□□□□ -0.67
BRD9-209ENST00000490814 ECE2O60344 883 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 PCK1P35558 622 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 SLC12A3P55017 1021 aa10.87□□□□□ -0.67
BRD9-209ENST00000490814 EIF3BP55884 814 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms