RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 DEFB128Q7Z7B8 93 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 CCT6BQ92526 530 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 EIF3DO15371 548 aaKnown RBP eCLIP15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 CYP26A1O43174 497 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 FKTNO75072 461 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 IL18RAPO95256 599 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 MOCS2O96007 188 aaPredicted RBP15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 SLC4A1P02730 911 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 FTLP02792 175 aaPredicted RBP15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 SKIP12755 728 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 ALDH3A1P30838 453 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 GBP1P32455 592 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 NAMPTP43490 491 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 EPHB1P54762 984 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 CPLX4Q7Z7G2 160 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 HSPH1Q92598 858 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 SEPT8Q92599 483 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 PCSK1NQ9UHG2 260 aa15.37■□□□□ 0.05
ARHGEF39-205ENST00000490638 MYPNQ86TC9 1320 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 SYNGAP1Q96PV0 1343 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 SLC15A5A6NIM6 579 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 PRRG1O14668 218 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 ATP2C2O75185 946 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 CRCPO75575 148 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 BEX3Q00994 111 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 BTBD8Q5XKL5 378 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 DARS2Q6PI48 645 aaKnown RBP15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 CXCL17Q6UXB2 119 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 RUFY4Q6ZNE9 571 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 SH3TC2Q8TF17 1288 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 ABHD10Q9NUJ1 306 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 PGRMC1O00264 195 aaKnown RBP15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 SLC16A3O15427 465 aaKnown RBP15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 HLA-DRAP01903 254 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 RPLP2P05387 115 aaKnown RBP15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 PCSK1P29120 753 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 SSTR3P32745 418 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 SHROOM1Q2M3G4 852 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 REPS2Q8NFH8 660 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 GANCQ8TET4 914 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 SIK2Q9H0K1 926 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 PFDN6O15212 129 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 USP2O75604 605 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 TOM1L1O75674 476 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 GRIK1P39086 918 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 RECQLP46063 649 aaPredicted RBP15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 FMR1Q06787 632 aaKnown RBP eCLIP15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 MAP2K5Q13163 448 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 ARID5BQ14865 1188 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 PPP1R13BQ96KQ4 1090 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 ASNSD1Q9NWL6 643 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 CDC23Q9UJX2 597 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 JRKLQ9Y4A0 524 aa15.36■□□□□ 0.05
ARHGEF39-205ENST00000490638 PGK1P00558 417 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 MXRA7P84157 204 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 CACNB2Q08289 660 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 EARS2Q5JPH6 523 aaKnown RBP15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 RNF219Q5W0B1 726 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 DENND2CQ68D51 928 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 CROCCP2Q86T23 111 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 RAB3IL1Q8TBN0 382 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 DNAJB3Q8WWF6 145 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 TSC1Q92574 1164 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 AGPAT3Q9NRZ7 376 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 EFCAB8A8MWE9 144 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 EXTL3O43909 919 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 GTF2F1P35269 517 aaKnown RBP eCLIP15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 FLT3LGP49771 235 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 RARRES1P49788 294 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 RWDD2BP57060 319 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 KRT17Q04695 432 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 GRIK4Q16099 956 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 TAF2Q6P1X5 1199 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 GPR142Q7Z601 462 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 TRAPPC12Q8WVT3 735 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 MKNK1Q9BUB5 465 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 SART1O43290 800 aaKnown RBP15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 PPARDQ03181 441 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 TRIM72Q6ZMU5 477 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 UHMK1Q8TAS1 419 aaKnown RBP15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 BTBD19C9JJ37 291 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 NOP14P78316 857 aaKnown RBP15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 TREML2Q5T2D2 321 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 ATP2A3Q93084 1043 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 PURBQ96QR8 312 aaKnown RBP15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 UBQLN1Q9UMX0 589 aaKnown RBP15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 DAAM1Q9Y4D1 1078 aa15.35■□□□□ 0.05
ARHGEF39-205ENST00000490638 C2CD2LO14523 706 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 MSCO60682 206 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 ZBED1O96006 694 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 SCP2P22307 547 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 ZNF280AP59817 542 aaPredicted RBP15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 GUCY2DQ02846 1103 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 PAN2Q504Q3 1202 aaKnown RBP15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 NIPA1Q7RTP0 329 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 BBOF1Q8ND07 529 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 EDEM3Q9BZQ6 932 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 FZD9O00144 591 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 WEE2P0C1S8 567 aa15.34■□□□□ 0.05
ARHGEF39-205ENST00000490638 GHRP10912 638 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms