RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 PLA2R1Q13018 1463 aa18.67■□□□□ 0.58
NPHP4-209ENST00000489180 CFAP73A6NFT4 308 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 PHKA2P46019 1235 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 CDH6P55285 790 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 NR1I3Q14994 352 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 DDX56Q9NY93 547 aaKnown RBP18.66■□□□□ 0.58
NPHP4-209ENST00000489180 KDSRQ06136 332 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 ORC2Q13416 577 aaPredicted RBP18.66■□□□□ 0.58
NPHP4-209ENST00000489180 KIAA1755Q5JYT7 1200 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 ICA1LQ8NDH6 482 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 TTC8Q8TAM2 541 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 PHF20Q9BVI0 1012 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 TRABDQ9H4I3 376 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 HPCAL4Q9UM19 191 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 COL15A1P39059 1388 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 NT5C2P49902 561 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 FAM96AQ9H5X1 160 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 ENO1P06733 434 aaKnown RBP18.66■□□□□ 0.58
NPHP4-209ENST00000489180 SCP2P22307 547 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 GPSM2P81274 684 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 ADSSL1Q8N142 457 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 DTX3LQ8TDB6 740 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 CPA5Q8WXQ8 436 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 SNX19Q92543 992 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 MEFVO15553 781 aaPredicted RBP18.66■□□□□ 0.58
NPHP4-209ENST00000489180 RPS6KA4O75676 772 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 GGPS1O95749 300 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 SRGNP10124 158 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 TYK2P29597 1187 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 CYP2C19P33261 490 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 IREB2P48200 963 aaKnown RBP18.66■□□□□ 0.58
NPHP4-209ENST00000489180 HAUS6Q7Z4H7 955 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 TC2NQ8N9U0 490 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 NSUN6Q8TEA1 469 aaKnown RBP18.66■□□□□ 0.58
NPHP4-209ENST00000489180 CCT8L2Q96SF2 557 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.66■□□□□ 0.58
NPHP4-209ENST00000489180 PARVAQ9NVD7 372 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.66■□□□□ 0.58
NPHP4-209ENST00000489180 SEL1LQ9UBV2 794 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 TFR2Q9UP52 801 aa18.66■□□□□ 0.58
NPHP4-209ENST00000489180 RTN2O75298 545 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 IL17RAQ96F46 866 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 FAM84BQ96KN1 310 aaPredicted RBP18.65■□□□□ 0.58
NPHP4-209ENST00000489180 MTA3Q9BTC8 594 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 PSMC5P62195 406 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 USP49Q70CQ1 688 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 FAM118BQ9BPY3 351 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 ISCA1Q9BUE6 129 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 LCMT1Q9UIC8 334 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 SLC18A3Q16572 532 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 HIF1AQ16665 826 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 FAM167AQ96KS9 214 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.65■□□□□ 0.58
NPHP4-209ENST00000489180 SLC13A4Q9UKG4 626 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 LRRC7Q96NW7 1537 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 MOCS2O96007 188 aaPredicted RBP18.65■□□□□ 0.58
NPHP4-209ENST00000489180 CIITAP33076 1130 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 P3H1Q32P28 736 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 FASTKD1Q53R41 847 aaKnown RBP18.65■□□□□ 0.58
NPHP4-209ENST00000489180 CCNI2Q6ZMN8 369 aaPredicted RBP18.65■□□□□ 0.58
NPHP4-209ENST00000489180 IRAK4Q9NWZ3 460 aa18.65■□□□□ 0.58
NPHP4-209ENST00000489180 ARHGEF37A1IGU5 675 aa18.64■□□□□ 0.58
NPHP4-209ENST00000489180 ORC4O43929 436 aa18.64■□□□□ 0.58
NPHP4-209ENST00000489180 CYP19A1P11511 503 aaPredicted RBP18.64■□□□□ 0.58
NPHP4-209ENST00000489180 OCA2Q04671 838 aa18.64■□□□□ 0.58
NPHP4-209ENST00000489180 IMPG1Q17R60 797 aa18.64■□□□□ 0.58
NPHP4-209ENST00000489180 TWF2Q6IBS0 349 aaKnown RBP18.64■□□□□ 0.58
NPHP4-209ENST00000489180 KDELC2Q7Z4H8 507 aa18.64■□□□□ 0.58
NPHP4-209ENST00000489180 AGO2Q9UKV8 859 aaKnown RBP18.64■□□□□ 0.58
NPHP4-209ENST00000489180 NRKQ7Z2Y5 1582 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 PFASO15067 1338 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 GALCP54803 685 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 EIF3HO15372 352 aaKnown RBP eCLIP18.64■□□□□ 0.57
NPHP4-209ENST00000489180 ATP9BO43861 1147 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 ATICP31939 592 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 PGM1P36871 562 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 GCOM2Q9BZD3 368 aaPredicted RBP18.64■□□□□ 0.57
NPHP4-209ENST00000489180 NPHS2Q9NP85 383 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 FAM8A1Q9UBU6 413 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 ATF5Q9Y2D1 282 aaPredicted RBP18.64■□□□□ 0.57
NPHP4-209ENST00000489180 TRPM1Q7Z4N2 1603 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 MED14O60244 1454 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 LCP1P13796 627 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 SFNP31947 248 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 PPARGP37231 505 aaPredicted RBP18.64■□□□□ 0.57
NPHP4-209ENST00000489180 EIF3EP60228 445 aaKnown RBP18.64■□□□□ 0.57
NPHP4-209ENST00000489180 CAPRIN2Q6IMN6 1127 aaKnown RBP18.64■□□□□ 0.57
NPHP4-209ENST00000489180 LRRC8EQ6NSJ5 796 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 CDKL3Q8IVW4 592 aaPredicted RBP18.64■□□□□ 0.57
NPHP4-209ENST00000489180 BEST2Q8NFU1 509 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 WRNIP1Q96S55 665 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 SENP2Q9HC62 589 aa18.64■□□□□ 0.57
NPHP4-209ENST00000489180 TOPORSQ9NS56 1045 aaPredicted RBP18.64■□□□□ 0.57
NPHP4-209ENST00000489180 ANO5Q75V66 913 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 C4orf33Q8N1A6 199 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 THEM5Q8N1Q8 247 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 STK4Q13043 487 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 DDIASQ8IXT1 998 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 IGDCC4Q8TDY8 1250 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 SNX5Q9Y5X3 404 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms