RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 KIFC3Q9BVG8 833 aa25.41■■□□□ 1.66
COL9A3-213ENST00000489045 KLK14Q9P0G3 267 aa25.41■■□□□ 1.66
COL9A3-213ENST00000489045 CDH22Q9UJ99 828 aa25.41■■□□□ 1.66
COL9A3-213ENST00000489045 SMC3Q9UQE7 1217 aa25.41■■□□□ 1.66
COL9A3-213ENST00000489045 USP20Q9Y2K6 914 aa25.41■■□□□ 1.66
COL9A3-213ENST00000489045 ZMYM2Q9UBW7 1377 aa25.41■■□□□ 1.66
COL9A3-213ENST00000489045 PLXNA3P51805 1871 aa25.4■■□□□ 1.66
COL9A3-213ENST00000489045 TRIOO75962 3097 aa25.4■■□□□ 1.66
COL9A3-213ENST00000489045 PRR33A8MZF0 331 aa25.4■■□□□ 1.66
COL9A3-213ENST00000489045 N4BP3O15049 544 aa25.4■■□□□ 1.66
COL9A3-213ENST00000489045 EDN1P05305 212 aa25.4■■□□□ 1.66
COL9A3-213ENST00000489045 EPCAMP16422 314 aa25.4■■□□□ 1.66
COL9A3-213ENST00000489045 ATP2C1P98194 919 aaPredicted RBP25.4■■□□□ 1.66
COL9A3-213ENST00000489045 GSTCDQ8NEC7 633 aa25.4■■□□□ 1.66
COL9A3-213ENST00000489045 KIFAP3Q92845 792 aa25.4■■□□□ 1.66
COL9A3-213ENST00000489045 MMTAG2Q9BU76 263 aaKnown RBP25.4■■□□□ 1.66
COL9A3-213ENST00000489045 MYH11P35749 1972 aa25.4■■□□□ 1.66
COL9A3-213ENST00000489045 F8W810 466 aa25.39■■□□□ 1.66
COL9A3-213ENST00000489045 ACKR2O00590 384 aa25.39■■□□□ 1.66
COL9A3-213ENST00000489045 SOD2P04179 222 aa25.39■■□□□ 1.66
COL9A3-213ENST00000489045 SLC22A17Q8WUG5 538 aa25.39■■□□□ 1.66
COL9A3-213ENST00000489045 HERC2P3Q9BVR0 1158 aa25.39■■□□□ 1.66
COL9A3-213ENST00000489045 EMILIN2Q9BXX0 1053 aa25.39■■□□□ 1.66
COL9A3-213ENST00000489045 ADAM7Q9H2U9 754 aa25.39■■□□□ 1.66
COL9A3-213ENST00000489045 DZANK1Q9NVP4 752 aa25.39■■□□□ 1.66
COL9A3-213ENST00000489045 DNM3Q9UQ16 869 aa25.39■■□□□ 1.66
COL9A3-213ENST00000489045 NR1I2O75469 434 aa25.38■■□□□ 1.65
COL9A3-213ENST00000489045 ITIH3Q06033 890 aa25.38■■□□□ 1.65
COL9A3-213ENST00000489045 GRIK3Q13003 919 aa25.38■■□□□ 1.65
COL9A3-213ENST00000489045 CES5AQ6NT32 575 aa25.38■■□□□ 1.65
COL9A3-213ENST00000489045 KLHL5Q96PQ7 755 aa25.38■■□□□ 1.65
COL9A3-213ENST00000489045 RPS6KC1Q96S38 1066 aa25.38■■□□□ 1.65
COL9A3-213ENST00000489045 MRPL17Q9NRX2 175 aaKnown RBP25.38■■□□□ 1.65
COL9A3-213ENST00000489045 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.38■■□□□ 1.65
COL9A3-213ENST00000489045 TRIP11Q15643 1979 aa25.37■■□□□ 1.65
COL9A3-213ENST00000489045 DENND4AQ7Z401 1863 aa25.37■■□□□ 1.65
COL9A3-213ENST00000489045 C2CD2LO14523 706 aa25.37■■□□□ 1.65
COL9A3-213ENST00000489045 LILRB3O75022 631 aa25.37■■□□□ 1.65
COL9A3-213ENST00000489045 URODP06132 367 aa25.37■■□□□ 1.65
COL9A3-213ENST00000489045 CNPP09543 421 aaKnown RBP25.37■■□□□ 1.65
COL9A3-213ENST00000489045 EFNA5P52803 228 aa25.37■■□□□ 1.65
COL9A3-213ENST00000489045 RARS2Q5T160 578 aaKnown RBP25.37■■□□□ 1.65
COL9A3-213ENST00000489045 EEF1DP3Q658K8 133 aa25.37■■□□□ 1.65
COL9A3-213ENST00000489045 TAS1R1Q7RTX1 841 aa25.37■■□□□ 1.65
COL9A3-213ENST00000489045 KCNK18Q7Z418 384 aa25.37■■□□□ 1.65
COL9A3-213ENST00000489045 PPFIBP1Q86W92 1011 aa25.37■■□□□ 1.65
COL9A3-213ENST00000489045 C12orf76Q8N812 135 aaPredicted RBP25.37■■□□□ 1.65
COL9A3-213ENST00000489045 ADPGKQ9BRR6 497 aa25.37■■□□□ 1.65
COL9A3-213ENST00000489045 SNTG2Q9NY99 539 aa25.37■■□□□ 1.65
COL9A3-213ENST00000489045 HCN4Q9Y3Q4 1203 aa25.37■■□□□ 1.65
COL9A3-213ENST00000489045 C2orf16Q68DN1 1984 aa25.36■■□□□ 1.65
COL9A3-213ENST00000489045 EFEMP2O95967 443 aa25.36■■□□□ 1.65
COL9A3-213ENST00000489045 SP100P23497 879 aaPredicted RBP25.36■■□□□ 1.65
COL9A3-213ENST00000489045 KLRC2P26717 231 aa25.36■■□□□ 1.65
COL9A3-213ENST00000489045 ZRSR1Q15695 479 aaKnown RBP25.36■■□□□ 1.65
COL9A3-213ENST00000489045 LARP1BQ659C4 914 aaKnown RBP25.36■■□□□ 1.65
COL9A3-213ENST00000489045 RNF168Q8IYW5 571 aaPredicted RBP25.36■■□□□ 1.65
COL9A3-213ENST00000489045 RUSC1Q9BVN2 902 aa25.36■■□□□ 1.65
COL9A3-213ENST00000489045 COLEC11Q9BWP8 271 aa25.36■■□□□ 1.65
COL9A3-213ENST00000489045 POMKQ9H5K3 350 aa25.36■■□□□ 1.65
COL9A3-213ENST00000489045 TECTAO75443 2155 aa25.35■■□□□ 1.65
COL9A3-213ENST00000489045 VWA3AA6NCI4 1184 aa25.35■■□□□ 1.65
COL9A3-213ENST00000489045 HIP1RO75146 1068 aa25.35■■□□□ 1.65
COL9A3-213ENST00000489045 RECQL4O94761 1208 aa25.35■■□□□ 1.65
COL9A3-213ENST00000489045 WEE2P0C1S8 567 aa25.35■■□□□ 1.65
COL9A3-213ENST00000489045 CLCN4P51793 760 aa25.35■■□□□ 1.65
COL9A3-213ENST00000489045 KANK3Q6NY19 840 aa25.35■■□□□ 1.65
COL9A3-213ENST00000489045 CABP7Q86V35 215 aa25.35■■□□□ 1.65
COL9A3-213ENST00000489045 DAW1Q8N136 415 aa25.35■■□□□ 1.65
COL9A3-213ENST00000489045 NECTIN4Q96NY8 510 aa25.35■■□□□ 1.65
COL9A3-213ENST00000489045 CCDC169A6NNP5 214 aa25.34■■□□□ 1.65
COL9A3-213ENST00000489045 GLUD2P49448 558 aa25.34■■□□□ 1.65
COL9A3-213ENST00000489045 PEX3P56589 373 aa25.34■■□□□ 1.65
COL9A3-213ENST00000489045 NT5DC1Q5TFE4 455 aa25.34■■□□□ 1.65
COL9A3-213ENST00000489045 ATF7IP2Q5U623 682 aa25.34■■□□□ 1.65
COL9A3-213ENST00000489045 RINT1Q6NUQ1 792 aa25.34■■□□□ 1.65
COL9A3-213ENST00000489045 RABGGTAQ92696 567 aa25.34■■□□□ 1.65
COL9A3-213ENST00000489045 FBXL18Q96ME1 805 aa25.34■■□□□ 1.65
COL9A3-213ENST00000489045 RIPOR3Q96MK2 946 aa25.34■■□□□ 1.65
COL9A3-213ENST00000489045 CACNG4Q9UBN1 327 aa25.34■■□□□ 1.65
COL9A3-213ENST00000489045 SSX2IPQ9Y2D8 614 aa25.34■■□□□ 1.65
COL9A3-213ENST00000489045 PHLPP2Q6ZVD8 1323 aa25.34■■□□□ 1.65
COL9A3-213ENST00000489045 K7ERI5 159 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 PTGESO14684 152 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 MTHFRP42898 656 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 NPTX2P47972 431 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 MAPK7Q13164 816 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 DCAF4L1Q3SXM0 396 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 HYIQ5T013 277 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 KIAA0319Q5VV43 1072 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 KIAA1841Q6NSI8 718 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 FUT10Q6P4F1 479 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 C1orf186Q6ZWK4 172 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 EDAQ92838 391 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 DRC1Q96MC2 740 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 PNMA5Q96PV4 448 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 TSHZ2Q9NRE2 1034 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 ADAM28Q9UKQ2 775 aa25.33■■□□□ 1.65
COL9A3-213ENST00000489045 MTCL1Q9Y4B5 1905 aaKnown RBP25.32■■□□□ 1.64
COL9A3-213ENST00000489045 SPDYE4A6NLX3 237 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms