RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 CCDC8Q9H0W5 538 aaPredicted RBP5.07□□□□□ -1.6
RFC4-213ENST00000489028 EPC1Q9H2F5 836 aa5.07□□□□□ -1.6
RFC4-213ENST00000489028 ZNF277Q9NRM2 450 aaPredicted RBP5.07□□□□□ -1.6
RFC4-213ENST00000489028 AURKAIP1Q9NWT8 199 aaPredicted RBP5.07□□□□□ -1.6
RFC4-213ENST00000489028 WASHC2AQ641Q2 1341 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 NARSO43776 548 aaKnown RBP5.06□□□□□ -1.6
RFC4-213ENST00000489028 AKAP8O43823 692 aaKnown RBP5.06□□□□□ -1.6
RFC4-213ENST00000489028 AKR1B10O60218 316 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 FAM20BO75063 409 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 KATNA1O75449 491 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 FSHBP01225 129 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 ACVRL1P37023 503 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 MCAMP43121 646 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 MTMR1Q13613 665 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 FAM50AQ14320 339 aaKnown RBP5.06□□□□□ -1.6
RFC4-213ENST00000489028 LSM12Q3MHD2 195 aaKnown RBP5.06□□□□□ -1.6
RFC4-213ENST00000489028 DCAF17Q5H9S7 520 aaPredicted RBP5.06□□□□□ -1.6
RFC4-213ENST00000489028 DOK3Q7L591 496 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 TRMT2AQ8IZ69 625 aaKnown RBP5.06□□□□□ -1.6
RFC4-213ENST00000489028 SLC16A11Q8NCK7 471 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 OR2I1PQ8NGU4 316 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 FATE1Q969F0 183 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 PAWRQ96IZ0 340 aaKnown RBP5.06□□□□□ -1.6
RFC4-213ENST00000489028 CDC5LQ99459 802 aaKnown RBP5.06□□□□□ -1.6
RFC4-213ENST00000489028 PDCD2LQ9BRP1 358 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 MENTQ9BUN1 341 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 CSRNP2Q9H175 543 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 KCNH6Q9H252 994 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 GREM2Q9H772 168 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 GPR45Q9Y5Y3 372 aa5.06□□□□□ -1.6
RFC4-213ENST00000489028 ATRNL1Q5VV63 1379 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 TRIM75PA6NK02 468 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 FZD9O00144 591 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 MT-CO1P00395 513 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 CRHR1P34998 444 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 GUCY2FP51841 1108 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 MALLQ13021 153 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 SEPT2Q15019 361 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 VPS72Q15906 364 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 ABCB5Q2M3G0 1257 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 ANO4Q32M45 955 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 MUM1L1Q5H9M0 696 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 MBNL2Q5VZF2 373 aaKnown RBP5.05□□□□□ -1.6
RFC4-213ENST00000489028 FAM83AQ86UY5 434 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 SYT12Q8IV01 421 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 C1orf162Q8NEQ5 155 aaPredicted RBP5.05□□□□□ -1.6
RFC4-213ENST00000489028 OR7D4Q8NG98 312 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 SLC35B2Q8TB61 432 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 PCDH12Q9NPG4 1184 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 TRHDEQ9UKU6 1024 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 SIK3Q9Y2K2 1263 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 PCDHGA2Q9Y5H1 932 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 COL4A3BPQ9Y5P4 624 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 HS3ST3A1Q9Y663 406 aa5.05□□□□□ -1.6
RFC4-213ENST00000489028 GOLGA6L6A8MZA4 724 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 GABRDO14764 452 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 PCDHGA12O60330 932 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 ZNF202O95125 648 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 GASTP01350 101 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 SLPIP03973 132 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 NR4A1P22736 598 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 ZFP36P26651 326 aaKnown RBP5.04□□□□□ -1.6
RFC4-213ENST00000489028 SREBF1P36956 1147 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 SLC6A9P48067 706 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 SLC5A3P53794 718 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 KLF10Q13118 480 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 TUBA3CQ13748 450 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 RABL3Q5HYI8 236 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 SYDE2Q5VT97 1194 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 TUBA3EQ6PEY2 450 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 RNF169Q8NCN4 708 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 GPATCH3Q96I76 525 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 LDAHQ9H6V9 325 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 BCO1Q9HAY6 547 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 SLC2A4RGQ9NR83 387 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 RBM12Q9NTZ6 932 aaKnown RBP5.04□□□□□ -1.6
RFC4-213ENST00000489028 PARPBPQ9NWS1 579 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 GPRC5BQ9NZH0 403 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 TUBD1Q9UJT1 453 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 ING1Q9UK53 422 aaPredicted RBP5.04□□□□□ -1.6
RFC4-213ENST00000489028 PCDHGA9Q9Y5G4 932 aaKnown RBP5.04□□□□□ -1.6
RFC4-213ENST00000489028 PCDHGA8Q9Y5G5 932 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 PCDHGA7Q9Y5G6 932 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 PCDHGA6Q9Y5G7 932 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 PCDHGA3Q9Y5H0 932 aa5.04□□□□□ -1.6
RFC4-213ENST00000489028 LEFTY2O00292 366 aa5.03□□□□□ -1.6
RFC4-213ENST00000489028 FZD7O75084 574 aa5.03□□□□□ -1.6
RFC4-213ENST00000489028 PHF2O75151 1096 aa5.03□□□□□ -1.6
RFC4-213ENST00000489028 GSPT1P15170 499 aaKnown RBP5.03□□□□□ -1.6
RFC4-213ENST00000489028 ALOX15P16050 662 aaPredicted RBP5.03□□□□□ -1.6
RFC4-213ENST00000489028 ECHS1P30084 290 aa5.03□□□□□ -1.6
RFC4-213ENST00000489028 APOBEC3AP31941 199 aaPredicted RBP5.03□□□□□ -1.6
RFC4-213ENST00000489028 PTPN7P35236 360 aa5.03□□□□□ -1.6
RFC4-213ENST00000489028 FLT3LGP49771 235 aa5.03□□□□□ -1.6
RFC4-213ENST00000489028 NOMO1Q15155 1222 aa5.03□□□□□ -1.6
RFC4-213ENST00000489028 METTL24Q5JXM2 366 aa5.03□□□□□ -1.6
RFC4-213ENST00000489028 ZNF572Q7Z3I7 529 aaPredicted RBP5.03□□□□□ -1.6
RFC4-213ENST00000489028 ZFPM1Q8IX07 1006 aa5.03□□□□□ -1.6
RFC4-213ENST00000489028 JADE3Q92613 823 aa5.03□□□□□ -1.6
RFC4-213ENST00000489028 MTMR8Q96EF0 704 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms