RNA–Protein interactions for RNA: ENST00000488206.5

TM2D1-208, Transcript of TM2 domain containing 1, humanhuman

TSL 5

Gene TM2D1, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-208ENST00000488206 ECHDC2Q86YB7 292 aa17.12■□□□□ 0.33
TM2D1-208ENST00000488206 C12orf56Q8IXR9 622 aa17.12■□□□□ 0.33
TM2D1-208ENST00000488206 POMGNT1Q8WZA1 660 aa17.12■□□□□ 0.33
TM2D1-208ENST00000488206 DHTKD1Q96HY7 919 aaPredicted RBP17.12■□□□□ 0.33
TM2D1-208ENST00000488206 TSG101Q99816 390 aa17.12■□□□□ 0.33
TM2D1-208ENST00000488206 MSTO1Q9BUK6 570 aa17.12■□□□□ 0.33
TM2D1-208ENST00000488206 KCTD10Q9H3F6 313 aa17.12■□□□□ 0.33
TM2D1-208ENST00000488206 ELAC1Q9H777 363 aaKnown RBP17.12■□□□□ 0.33
TM2D1-208ENST00000488206 IPPQ9Y573 584 aa17.12■□□□□ 0.33
TM2D1-208ENST00000488206 A0A0B4J269 797 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 KIAA0391O15091 583 aaKnown RBP17.11■□□□□ 0.33
TM2D1-208ENST00000488206 TGFB1I1O43294 461 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 ZNF623O75123 536 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 STAG3L1P0CL83 205 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 BMP8BP34820 402 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 DPCR1Q3MIW9 517 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 RASIP1Q5U651 963 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 NPAS4Q8IUM7 802 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 PGBD4Q96DM1 585 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 ZBTB45Q96K62 511 aaPredicted RBP17.11■□□□□ 0.33
TM2D1-208ENST00000488206 RNPC3Q96LT9 517 aaKnown RBP17.11■□□□□ 0.33
TM2D1-208ENST00000488206 SLC9A7Q96T83 725 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 IKZF4Q9H2S9 585 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 NXF3Q9H4D5 531 aaKnown RBP17.11■□□□□ 0.33
TM2D1-208ENST00000488206 ANO10Q9NW15 660 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 TMEM161AQ9NX61 479 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 LRFN2Q9ULH4 789 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 SLC4A7Q9Y6M7 1214 aa17.11■□□□□ 0.33
TM2D1-208ENST00000488206 BICDL2A1A5D9 508 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 PPP1R3GB7ZBB8 358 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 OGTO15294 1046 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 HOXA2O43364 376 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 EOMESO95936 686 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 CD44P16070 742 aaKnown RBP17.1■□□□□ 0.33
TM2D1-208ENST00000488206 IBSPP21815 317 aaPredicted RBP17.1■□□□□ 0.33
TM2D1-208ENST00000488206 ADSSP30520 456 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 GRM5P41594 1212 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 FAM189BP81408 668 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 DEFB103AP81534 67 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 LRRC63Q05C16 580 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 PAK1Q13153 545 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 NFIL3Q16649 462 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 ZSCAN23Q3MJ62 389 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 ZCWPW2Q504Y3 356 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 C9orf50Q5SZB4 431 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 KLHL10Q6JEL2 608 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 FOXR2Q6PJQ5 311 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.1■□□□□ 0.33
TM2D1-208ENST00000488206 MRPL10Q7Z7H8 261 aaKnown RBP17.1■□□□□ 0.33
TM2D1-208ENST00000488206 ZNF598Q86UK7 904 aaKnown RBP17.1■□□□□ 0.33
TM2D1-208ENST00000488206 SMG8Q8ND04 991 aaKnown RBP17.1■□□□□ 0.33
TM2D1-208ENST00000488206 NELFBQ8WX92 580 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 P2RX5Q93086 422 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 CBWD1Q9BRT8 395 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 CCDC94Q9BW85 323 aaPredicted RBP17.1■□□□□ 0.33
TM2D1-208ENST00000488206 HAPLN2Q9GZV7 340 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 AGO2Q9UKV8 859 aaKnown RBP17.1■□□□□ 0.33
TM2D1-208ENST00000488206 CTNND2Q9UQB3 1225 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 TRAF3IP3Q9Y228 551 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 PCDHB7Q9Y5E2 793 aa17.1■□□□□ 0.33
TM2D1-208ENST00000488206 SYCE3A1L190 88 aa17.09■□□□□ 0.33
TM2D1-208ENST00000488206 CCDC192P0DO97 292 aa17.09■□□□□ 0.33
TM2D1-208ENST00000488206 ITGA4P13612 1032 aa17.09■□□□□ 0.33
TM2D1-208ENST00000488206 ATF7P17544 494 aaPredicted RBP17.09■□□□□ 0.33
TM2D1-208ENST00000488206 CCNE1P24864 410 aa17.09■□□□□ 0.33
TM2D1-208ENST00000488206 TYRO3Q06418 890 aa17.09■□□□□ 0.33
TM2D1-208ENST00000488206 EDRF1Q3B7T1 1238 aa17.09■□□□□ 0.33
TM2D1-208ENST00000488206 CT47A1Q5JQC4 288 aaPredicted RBP17.09■□□□□ 0.33
TM2D1-208ENST00000488206 CENPPQ6IPU0 288 aa17.09■□□□□ 0.33
TM2D1-208ENST00000488206 RNF169Q8NCN4 708 aa17.09■□□□□ 0.33
TM2D1-208ENST00000488206 TMEM174Q8WUU8 243 aa17.09■□□□□ 0.33
TM2D1-208ENST00000488206 RSPH1Q8WYR4 309 aa17.09■□□□□ 0.33
TM2D1-208ENST00000488206 SEMA6BQ9H3T3 888 aa17.09■□□□□ 0.33
TM2D1-208ENST00000488206 UBN1Q9NPG3 1134 aa17.09■□□□□ 0.33
TM2D1-208ENST00000488206 HSPBP1Q9NZL4 362 aa17.09■□□□□ 0.33
TM2D1-208ENST00000488206 CXXC1Q9P0U4 656 aaPredicted RBP17.09■□□□□ 0.33
TM2D1-208ENST00000488206 TTC3P53804 2025 aa17.08■□□□□ 0.33
TM2D1-208ENST00000488206 EXTL3O43909 919 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 FAM189A1O60320 539 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 LDHAP00338 332 aaKnown RBP17.08■□□□□ 0.32
TM2D1-208ENST00000488206 NR3C1P04150 777 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 CLTAP09496 248 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 RPL13P26373 211 aaKnown RBP17.08■□□□□ 0.32
TM2D1-208ENST00000488206 CYP2J2P51589 502 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 YARSP54577 528 aaKnown RBP17.08■□□□□ 0.32
TM2D1-208ENST00000488206 MYBPC2Q14324 1141 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 SHHQ15465 462 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 SLC9A9Q8IVB4 645 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 THNSL1Q8IYQ7 743 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 GPD1LQ8N335 351 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 CEP120Q8N960 986 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 PHOSPHO2Q8TCD6 241 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 APOL6Q9BWW8 343 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 TOPORSQ9NS56 1045 aaPredicted RBP17.08■□□□□ 0.32
TM2D1-208ENST00000488206 RWDD2AQ9UIY3 292 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 HES2Q9Y543 173 aa17.08■□□□□ 0.32
TM2D1-208ENST00000488206 RALGAPA2Q2PPJ7 1873 aa17.07■□□□□ 0.32
TM2D1-208ENST00000488206 CLIC2O15247 247 aa17.07■□□□□ 0.32
TM2D1-208ENST00000488206 RECQL4O94761 1208 aa17.07■□□□□ 0.32
TM2D1-208ENST00000488206 ATP2A2P16615 1042 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms