RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 BUB1BO60566 1050 aaPredicted RBP12.63□□□□□ -0.39
TRA2B-214ENST00000487615 ACSL3O95573 720 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 MMP14P50281 582 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 BACE1P56817 501 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 DYNLT1P63172 113 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 GPR162Q16538 588 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 ZNF354CQ86Y25 554 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 KIFC3Q9BVG8 833 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 CALN1Q9BXU9 219 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.63□□□□□ -0.39
TRA2B-214ENST00000487615 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.63□□□□□ -0.39
TRA2B-214ENST00000487615 ALG6Q9Y672 507 aa12.63□□□□□ -0.39
TRA2B-214ENST00000487615 DOT1LQ8TEK3 1739 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 PIK3CDO00329 1044 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 TJP3O95049 919 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 AP3M2P53677 418 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 MXRA7P84157 204 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 ITIH3Q06033 890 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 ZKSCAN4Q969J2 545 aaPredicted RBP12.62□□□□□ -0.39
TRA2B-214ENST00000487615 RNF34Q969K3 372 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 PSMD1Q99460 953 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 DMGDHQ9UI17 866 aaKnown RBP12.62□□□□□ -0.39
TRA2B-214ENST00000487615 F8VZ95 297 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 PHKA2P46019 1235 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 PMS2P54278 862 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 TTLL4Q14679 1199 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 CASC4Q6P4E1 433 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 FOXR2Q6PJQ5 311 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 RHOT1Q8IXI2 618 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 C4orf19Q8IY42 314 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 SLC30A5Q8TAD4 765 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 APOL6Q9BWW8 343 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 RANBP17Q9H2T7 1088 aaKnown RBP12.62□□□□□ -0.39
TRA2B-214ENST00000487615 AGO4Q9HCK5 861 aaKnown RBP12.62□□□□□ -0.39
TRA2B-214ENST00000487615 KLHL14Q9P2G3 628 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 N4BP2Q86UW6 1770 aaPredicted RBP12.62□□□□□ -0.39
TRA2B-214ENST00000487615 RNF225M0QZC1 329 aaPredicted RBP12.62□□□□□ -0.39
TRA2B-214ENST00000487615 COPB2P35606 906 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 RARRES1P49788 294 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 GPC3P51654 580 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 MYO1EQ12965 1108 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 DUOXA2Q1HG44 320 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 BTNL9Q6UXG8 535 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 AMIGO3Q86WK7 504 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 RNF149Q8NC42 400 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 SEPT1Q8WYJ6 367 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 PLCD4Q9BRC7 762 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 CARD9Q9H257 536 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 DNAJC17Q9NVM6 304 aaKnown RBP12.62□□□□□ -0.39
TRA2B-214ENST00000487615 MCF2LO15068 1137 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 PSMA2P25787 234 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 CASP5P51878 434 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 HYIQ5T013 277 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 PNMA8AQ86V59 439 aaPredicted RBP12.62□□□□□ -0.39
TRA2B-214ENST00000487615 SESTD1Q86VW0 696 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 EFCAB13Q8IY85 973 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 CCDC197Q8NCU1 140 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 ETNPPLQ8TBG4 499 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 CFAP57Q96MR6 1250 aa12.62□□□□□ -0.39
TRA2B-214ENST00000487615 BAZ2AQ9UIF9 1905 aaKnown RBP12.62□□□□□ -0.39
TRA2B-214ENST00000487615 EPHB6O15197 1021 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 PJA2O43164 708 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 KCNV1Q6PIU1 500 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 CBWD2Q8IUF1 395 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 CHST13Q8NET6 341 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 SPATA33Q96N06 139 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 MED15Q96RN5 788 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 VPS33BQ9H267 617 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 DBR1Q9UK59 544 aaKnown RBP12.61□□□□□ -0.39
TRA2B-214ENST00000487615 STRIP2Q9ULQ0 834 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 ADAMTS3O15072 1205 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 ACTR2P61160 394 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 CCDC6Q16204 474 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 KIAA1755Q5JYT7 1200 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 OR6B2Q6IFH4 312 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 HEXIM2Q96MH2 286 aaKnown RBP12.61□□□□□ -0.39
TRA2B-214ENST00000487615 THAP2Q9H0W7 228 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 LCMT1Q9UIC8 334 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 PCDHB2Q9Y5E7 798 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 NPTX2P47972 431 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 GTF2A1P52655 376 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-214ENST00000487615 MAGOHP61326 146 aaKnown RBP12.61□□□□□ -0.39
TRA2B-214ENST00000487615 SARNPP82979 210 aaKnown RBP12.61□□□□□ -0.39
TRA2B-214ENST00000487615 TNFAIP2Q03169 654 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 NIPA1Q7RTP0 329 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 KCTD6Q8NC69 237 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 RNF25Q96BH1 459 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-214ENST00000487615 ZNF668Q96K58 619 aaPredicted RBP12.61□□□□□ -0.39
TRA2B-214ENST00000487615 SMC6Q96SB8 1091 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 PXMP2Q9NR77 195 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 MYH3P11055 1940 aa12.61□□□□□ -0.39
TRA2B-214ENST00000487615 IGKV6D-41A0A0C4DH26 115 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 PSMD10O75832 226 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 TGFB2P61812 414 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 IRX5P78411 483 aaPredicted RBP12.6□□□□□ -0.39
TRA2B-214ENST00000487615 CAV1Q03135 178 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 ECM1Q16610 540 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 MMP19Q99542 508 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 TRIM51Q9BSJ1 452 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 TLR10Q9BXR5 811 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms