RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 C1orf186Q6ZWK4 172 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 APTXQ7Z2E3 356 aaKnown RBP14.16□□□□□ -0.14
HMGN1-216ENST00000486741 CEP57Q86XR8 500 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 RFX6Q8HWS3 928 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 KAT5Q92993 513 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 KIAA1683Q9H0B3 1180 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 MLXIPLQ9NP71 852 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 NUP98P52948 1817 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 M0R2N6 131 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 WEE2P0C1S8 567 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 ATP2A2P16615 1042 aaKnown RBP14.16□□□□□ -0.14
HMGN1-216ENST00000486741 COMTP21964 271 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 DLG4P78352 724 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 WDR72Q3MJ13 1102 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 ALS2CLQ60I27 953 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 TAOK1Q7L7X3 1001 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 APBB1IPQ7Z5R6 666 aaPredicted RBP14.16□□□□□ -0.14
HMGN1-216ENST00000486741 TPCN2Q8NHX9 752 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 SEPT1Q8WYJ6 367 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 ADAM33Q9BZ11 813 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 CD2APQ9Y5K6 639 aa14.16□□□□□ -0.14
HMGN1-216ENST00000486741 IGKV6D-41A0A0C4DH26 115 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 HLA-DRAP01903 254 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 NFX1Q12986 1120 aaKnown RBP14.15□□□□□ -0.14
HMGN1-216ENST00000486741 IFT88Q13099 833 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 MTM1Q13496 603 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 SPOPLQ6IQ16 392 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 CCDC137Q6PK04 289 aaKnown RBP14.15□□□□□ -0.14
HMGN1-216ENST00000486741 RANBP17Q9H2T7 1088 aaKnown RBP14.15□□□□□ -0.14
HMGN1-216ENST00000486741 NGRNQ9NPE2 291 aaKnown RBP14.15□□□□□ -0.14
HMGN1-216ENST00000486741 CYP26B1Q9NR63 512 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 L1RE1Q9UN81 338 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 NKRFO15226 690 aaKnown RBP eCLIP14.15□□□□□ -0.14
HMGN1-216ENST00000486741 STX2P32856 288 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 CATSPER4Q7RTX7 472 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 CCDC13Q8IYE1 715 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 GRK7Q8WTQ7 553 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 SYN2Q92777 582 aaPredicted RBP14.15□□□□□ -0.14
HMGN1-216ENST00000486741 PSMD1Q99460 953 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 TLR10Q9BXR5 811 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 KIAA1586Q9HCI6 787 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 SNED1Q8TER0 1413 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 MIF4GDA9UHW6 222 aaKnown RBP14.15□□□□□ -0.14
HMGN1-216ENST00000486741 F8VZ95 297 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 GOLGA8MH3BSY2 632 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 MMEP08473 750 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 PCNX4Q63HM2 1172 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 POTEAQ6S8J7 498 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 PALM2Q8IXS6 379 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 RBM46Q8TBY0 533 aaKnown RBP14.15□□□□□ -0.14
HMGN1-216ENST00000486741 SUCLA2Q9P2R7 463 aaPredicted RBP14.15□□□□□ -0.14
HMGN1-216ENST00000486741 TARSL2A2RTX5 802 aaKnown RBP14.15□□□□□ -0.14
HMGN1-216ENST00000486741 GRID2IPA4D2P6 1211 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 H3BQF6 201 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 RTN2O75298 545 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 CUL1Q13616 776 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 TRIM50Q86XT4 487 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 USP38Q8NB14 1042 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 DOT1LQ8TEK3 1739 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 HSPH1Q92598 858 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 TRIM11Q96F44 468 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 MED10Q9BTT4 135 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 MRPL4Q9BYD3 311 aaKnown RBP14.15□□□□□ -0.14
HMGN1-216ENST00000486741 HPCAL4Q9UM19 191 aa14.15□□□□□ -0.14
HMGN1-216ENST00000486741 SYNGAP1Q96PV0 1343 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 PRKCBP05771 671 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 TCF7P36402 384 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-216ENST00000486741 FKBP1AP62942 108 aaKnown RBP14.14□□□□□ -0.15
HMGN1-216ENST00000486741 PPP2R5CQ13362 524 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 HSD17B14Q9BPX1 270 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 ANKEF1Q9NU02 776 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 COL18A1P39060 1754 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 CYP3A7-CYP3A51PA0A087WV96 503 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 CYP3A7P24462 503 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 PSMA2P25787 234 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 CDK17Q00537 523 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 NCOA4Q13772 614 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 TTLL4Q14679 1199 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 MMS22LQ6ZRQ5 1243 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 SLC47A2Q86VL8 602 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 MTFR1LQ9H019 292 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 INTS9Q9NV88 658 aaKnown RBP14.14□□□□□ -0.15
HMGN1-216ENST00000486741 TXNDC16Q9P2K2 825 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 TGFB2P61812 414 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 ORC1Q13415 861 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 KIAA1755Q5JYT7 1200 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 TMEM35BQ8NCS4 154 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 BAP1Q92560 729 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 TATDN2Q93075 761 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 TMEM117Q9H0C3 514 aa14.14□□□□□ -0.15
HMGN1-216ENST00000486741 ADM5C9JUS6 153 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 MYCP01106 439 aaPredicted RBP14.13□□□□□ -0.15
HMGN1-216ENST00000486741 GPC3P51654 580 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 MAGOHP61326 146 aaKnown RBP14.13□□□□□ -0.15
HMGN1-216ENST00000486741 BASP1P80723 227 aaKnown RBP14.13□□□□□ -0.15
HMGN1-216ENST00000486741 DLK2Q6UY11 383 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 TCP11Q8WWU5 503 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 ASTN1O14525 1302 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 EGFRP00533 1210 aa14.13□□□□□ -0.15
HMGN1-216ENST00000486741 ITGA4P13612 1032 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms