RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 TGM5O43548 720 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 CTNND1O60716 968 aaKnown RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 MTRF1O75570 445 aaKnown RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 BBOX1O75936 387 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 PRAMEF1O95521 474 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 ZBED1O96006 694 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 SRGAP2CP0DJJ0 459 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 MTHFD1P11586 935 aaKnown RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 SRFP11831 508 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 SKILP12757 684 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 MUTP22033 750 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 GALNSP34059 522 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 BMP8BP34820 402 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 KRT9P35527 623 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 GPR3P46089 330 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 CACNB2Q08289 660 aaPredicted RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 LRRC74AQ0VAA2 488 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 NMIQ13287 307 aaPredicted RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 GALEQ14376 348 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 PKN2Q16513 984 aaKnown RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 CRY1Q16526 586 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 AP1ARQ63HQ0 302 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 RETSATQ6NUM9 610 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 TTLL10Q6ZVT0 673 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 RUFY3Q7L099 469 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 TMC3Q7Z5M5 1100 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 CCDC103Q8IW40 242 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 RNF168Q8IYW5 571 aaPredicted RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 CARNMT1Q8N4J0 409 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 ZNF655Q8N720 491 aaPredicted RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 TDRD7Q8NHU6 1098 aaKnown RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 PIWIL2Q8TC59 973 aaKnown RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 KIAA1524Q8TCG1 905 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 BICD2Q8TD16 824 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 MYLIPQ8WY64 445 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 CTNNBL1Q8WYA6 563 aaPredicted RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 CNDP2Q96KP4 475 aaKnown RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 FCRL3Q96P31 734 aaPredicted RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 ACAP3Q96P50 834 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 ORAI2Q96SN7 254 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 SEC62Q99442 399 aaKnown RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 BARD1Q99728 777 aaKnown RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 TCHPQ9BT92 498 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 RNF38Q9H0F5 515 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 SLC12A5Q9H2X9 1139 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 TRIT1Q9H3H1 467 aaKnown RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 ZWILCHQ9H900 591 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 GPRC5CQ9NQ84 441 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 POGKQ9P215 609 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 WDR35Q9P2L0 1181 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 PPARGC1AQ9UBK2 798 aaKnown RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 CFDP1Q9UEE9 299 aaPredicted RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 TMEFF2Q9UIK5 374 aaPredicted RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 TMEM59LQ9UK28 342 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 INVSQ9Y283 1065 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 ATP6V0A2Q9Y487 856 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 ANGPTL3Q9Y5C1 460 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 CAPN6Q9Y6Q1 641 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 GOLGA3Q08378 1498 aa5.04□□□□□ -1.6
RTN4-213ENST00000485749 EIF4G1Q04637 1599 aaKnown RBP5.04□□□□□ -1.6
RTN4-213ENST00000485749 A0A1B0GVC2 190 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 B4DLN1 442 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 TLR5O60602 858 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 TMEM127O75204 238 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 LRRN2O75325 713 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 OFD1O75665 1012 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 PYGLP06737 847 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 CD3EP07766 207 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 HSPA5P11021 654 aaKnown RBP5.03□□□□□ -1.6
RTN4-213ENST00000485749 EEF2P13639 858 aaKnown RBP5.03□□□□□ -1.6
RTN4-213ENST00000485749 PLS3P13797 630 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 RHCEP18577 417 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 TPP2P29144 1249 aaPredicted RBP5.03□□□□□ -1.6
RTN4-213ENST00000485749 HSPA1LP34931 641 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 CHKAP35790 457 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 CTSKP43235 329 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 MAGEA8P43361 318 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 DNM2P50570 870 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 HTRA3P83110 453 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 SMAD3P84022 425 aaKnown RBP5.03□□□□□ -1.6
RTN4-213ENST00000485749 RHDQ02161 417 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 TNIP1Q15025 636 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 ZNF174Q15697 407 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 SMAD2Q15796 467 aaKnown RBP5.03□□□□□ -1.6
RTN4-213ENST00000485749 PRR16Q569H4 304 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 ATAT1Q5SQI0 421 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 IFIT1BQ5T764 474 aaKnown RBP5.03□□□□□ -1.6
RTN4-213ENST00000485749 NUGGCQ68CJ6 796 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 CRTC1Q6UUV9 634 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 ATG14Q6ZNE5 492 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 USP51Q70EK9 711 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 BEND5Q7L4P6 421 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 ANKRD18AQ8IVF6 992 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 ELOA2Q8IYF1 753 aaPredicted RBP5.03□□□□□ -1.6
RTN4-213ENST00000485749 MYOCDQ8IZQ8 938 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 DTWD2Q8NBA8 298 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 RCBTB1Q8NDN9 531 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 ANKRD49Q8WVL7 239 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 KCNN1Q92952 543 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 UBE2FQ969M7 185 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms