RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 TARS2Q9BW92 718 aaKnown RBP19.52■□□□□ 0.72
SREBF1-213ENST00000485080 STRA6Q9BX79 667 aa19.52■□□□□ 0.72
SREBF1-213ENST00000485080 TBC1D13Q9NVG8 400 aa19.52■□□□□ 0.72
SREBF1-213ENST00000485080 TBX20Q9UMR3 447 aa19.52■□□□□ 0.72
SREBF1-213ENST00000485080 PLAGL2Q9UPG8 496 aa19.52■□□□□ 0.72
SREBF1-213ENST00000485080 USP20Q9Y2K6 914 aa19.52■□□□□ 0.72
SREBF1-213ENST00000485080 HES2Q9Y543 173 aa19.52■□□□□ 0.72
SREBF1-213ENST00000485080 REV3LO60673 3130 aa19.51■□□□□ 0.71
SREBF1-213ENST00000485080 KIAA1671Q9BY89 1806 aa19.51■□□□□ 0.71
SREBF1-213ENST00000485080 ARL5CA6NH57 179 aa19.51■□□□□ 0.71
SREBF1-213ENST00000485080 PPP1R37O75864 691 aa19.51■□□□□ 0.71
SREBF1-213ENST00000485080 MCF2P10911 925 aa19.51■□□□□ 0.71
SREBF1-213ENST00000485080 PFKFB1P16118 471 aa19.51■□□□□ 0.71
SREBF1-213ENST00000485080 UBE3AQ05086 875 aa19.51■□□□□ 0.71
SREBF1-213ENST00000485080 TMEM132AQ24JP5 1023 aa19.51■□□□□ 0.71
SREBF1-213ENST00000485080 MAP4K3Q8IVH8 894 aa19.51■□□□□ 0.71
SREBF1-213ENST00000485080 COLGALT1Q8NBJ5 622 aa19.51■□□□□ 0.71
SREBF1-213ENST00000485080 HVCN1Q96D96 273 aa19.51■□□□□ 0.71
SREBF1-213ENST00000485080 MRPL38Q96DV4 380 aaKnown RBP19.51■□□□□ 0.71
SREBF1-213ENST00000485080 BRWD1Q9NSI6 2320 aa19.51■□□□□ 0.71
SREBF1-213ENST00000485080 COL4A4P53420 1690 aaPredicted RBP19.5■□□□□ 0.71
SREBF1-213ENST00000485080 K7ENM7 598 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 ACTN4O43707 911 aaKnown RBP19.5■□□□□ 0.71
SREBF1-213ENST00000485080 PPM1AP35813 382 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 PLCB3Q01970 1234 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 ALCAMQ13740 583 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 PTPROQ16827 1216 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 LONRF3Q496Y0 759 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 SPOUT1Q5T280 376 aaKnown RBP19.5■□□□□ 0.71
SREBF1-213ENST00000485080 KCNT2Q6UVM3 1135 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 MPZL3Q6UWV2 235 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 SFR1Q86XK3 245 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 CCDC65Q8IXS2 484 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 KLHL23Q8NBE8 558 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 GSTCDQ8NEC7 633 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 SPPL3Q8TCT6 385 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 ZNF558Q96NG5 402 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 GAD1Q99259 594 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 CDT1Q9H211 546 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 ZHX3Q9H4I2 956 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 CHMP5Q9NZZ3 219 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 HCSTQ9UBK5 93 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 LZTS1Q9Y250 596 aa19.5■□□□□ 0.71
SREBF1-213ENST00000485080 A0A1B0GVL5 298 aa19.49■□□□□ 0.71
SREBF1-213ENST00000485080 ITGB1P05556 798 aa19.49■□□□□ 0.71
SREBF1-213ENST00000485080 MYL1P05976 194 aa19.49■□□□□ 0.71
SREBF1-213ENST00000485080 IGFBP4P22692 258 aa19.49■□□□□ 0.71
SREBF1-213ENST00000485080 NMT1P30419 496 aaKnown RBP19.49■□□□□ 0.71
SREBF1-213ENST00000485080 GRM5P41594 1212 aa19.49■□□□□ 0.71
SREBF1-213ENST00000485080 AFF1P51825 1210 aaKnown RBP19.49■□□□□ 0.71
SREBF1-213ENST00000485080 MCL1Q07820 350 aa19.49■□□□□ 0.71
SREBF1-213ENST00000485080 HERC4Q5GLZ8 1057 aaPredicted RBP19.49■□□□□ 0.71
SREBF1-213ENST00000485080 MAFAQ8NHW3 353 aaPredicted RBP19.49■□□□□ 0.71
SREBF1-213ENST00000485080 MRPS27Q92552 414 aaKnown RBP19.49■□□□□ 0.71
SREBF1-213ENST00000485080 TMEM175Q9BSA9 504 aa19.49■□□□□ 0.71
SREBF1-213ENST00000485080 NRDE2Q9H7Z3 1164 aa19.49■□□□□ 0.71
SREBF1-213ENST00000485080 PANK4Q9NVE7 773 aa19.49■□□□□ 0.71
SREBF1-213ENST00000485080 INPP5FQ9Y2H2 1132 aa19.49■□□□□ 0.71
SREBF1-213ENST00000485080 A0A0C4DFX4 3053 aa19.49■□□□□ 0.71
SREBF1-213ENST00000485080 GRM6O15303 877 aa19.48■□□□□ 0.71
SREBF1-213ENST00000485080 AKAP5P24588 427 aa19.48■□□□□ 0.71
SREBF1-213ENST00000485080 MLH1P40692 756 aa19.48■□□□□ 0.71
SREBF1-213ENST00000485080 SYKP43405 635 aa19.48■□□□□ 0.71
SREBF1-213ENST00000485080 ALDH7A1P49419 539 aaKnown RBP19.48■□□□□ 0.71
SREBF1-213ENST00000485080 DSC1Q08554 894 aa19.48■□□□□ 0.71
SREBF1-213ENST00000485080 ZNF568Q3ZCX4 644 aa19.48■□□□□ 0.71
SREBF1-213ENST00000485080 CEP57L1Q8IYX8 460 aa19.48■□□□□ 0.71
SREBF1-213ENST00000485080 STAMQ92783 540 aa19.48■□□□□ 0.71
SREBF1-213ENST00000485080 MRPL44Q9H9J2 332 aaKnown RBP19.48■□□□□ 0.71
SREBF1-213ENST00000485080 GDPD2Q9HCC8 539 aa19.48■□□□□ 0.71
SREBF1-213ENST00000485080 SNTG2Q9NY99 539 aa19.48■□□□□ 0.71
SREBF1-213ENST00000485080 PCDHB13Q9Y5F0 798 aa19.48■□□□□ 0.71
SREBF1-213ENST00000485080 PVALEFA0A1B0GWK0 134 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 CLDN3O15551 220 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 FGF18O76093 207 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 RECQL4O94761 1208 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 GALTP07902 379 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 IDEP14735 1019 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 NDUFA8P51970 172 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 BCAR1P56945 870 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 RNASELQ05823 741 aaKnown RBP19.47■□□□□ 0.71
SREBF1-213ENST00000485080 EHHADHQ08426 723 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 GRIK3Q13003 919 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 CAMK1Q14012 370 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 NOLC1Q14978 699 aaKnown RBP eCLIP19.47■□□□□ 0.71
SREBF1-213ENST00000485080 XKR4Q5GH76 650 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 UNC13DQ70J99 1090 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 ZNF280BQ86YH2 543 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 SLC39A11Q8N1S5 342 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 FSIP1Q8NA03 581 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 ZFP42Q96MM3 310 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 TCHPQ9BT92 498 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 APOL6Q9BWW8 343 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 MIOSQ9NXC5 875 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 SPG21Q9NZD8 308 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 PARP2Q9UGN5 583 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 SERTAD1Q9UHV2 236 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 STYXL1Q9Y6J8 313 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 UNC80Q8N2C7 3258 aa19.47■□□□□ 0.71
SREBF1-213ENST00000485080 HNRNPDLO14979 420 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms