RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 ALDH7A1P49419 539 aaKnown RBP17.83■□□□□ 0.44
DDR1-246ENST00000485023 NCKAP1LP55160 1127 aa17.83■□□□□ 0.44
DDR1-246ENST00000485023 CSPP1Q1MSJ5 1256 aa17.83■□□□□ 0.44
DDR1-246ENST00000485023 DCAF4L1Q3SXM0 396 aa17.83■□□□□ 0.44
DDR1-246ENST00000485023 ATL3Q6DD88 541 aa17.83■□□□□ 0.44
DDR1-246ENST00000485023 EP400NLQ6ZTU2 488 aa17.83■□□□□ 0.44
DDR1-246ENST00000485023 SLC39A11Q8N1S5 342 aa17.83■□□□□ 0.44
DDR1-246ENST00000485023 MICAL1Q8TDZ2 1067 aa17.83■□□□□ 0.44
DDR1-246ENST00000485023 BICD1Q96G01 975 aa17.83■□□□□ 0.44
DDR1-246ENST00000485023 ACO2Q99798 780 aaKnown RBP17.83■□□□□ 0.44
DDR1-246ENST00000485023 UBN1Q9NPG3 1134 aa17.83■□□□□ 0.44
DDR1-246ENST00000485023 MIOSQ9NXC5 875 aa17.83■□□□□ 0.44
DDR1-246ENST00000485023 SPG21Q9NZD8 308 aa17.83■□□□□ 0.44
DDR1-246ENST00000485023 TRAK2O60296 914 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 RECQL4O94761 1208 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 NMT1P30419 496 aaKnown RBP17.82■□□□□ 0.44
DDR1-246ENST00000485023 CA8P35219 290 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 PPM1AP35813 382 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 ZNF131P52739 623 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 OSTNP61366 133 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 KRT85P78386 507 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 TFF2Q03403 129 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 HAUS6Q7Z4H7 955 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 ADGRD2Q7Z7M1 963 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 SFR1Q86XK3 245 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 FAM178BQ8IXR5 827 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 CEP120Q8N960 986 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 BCL7CQ8WUZ0 217 aaPredicted RBP17.82■□□□□ 0.44
DDR1-246ENST00000485023 MRPS27Q92552 414 aaKnown RBP17.82■□□□□ 0.44
DDR1-246ENST00000485023 DDX12PQ92771 950 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 SPATA32Q96LK8 384 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 RPS6KC1Q96S38 1066 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 NTPCRQ9BSD7 190 aaKnown RBP17.82■□□□□ 0.44
DDR1-246ENST00000485023 TCHPQ9BT92 498 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 CDT1Q9H211 546 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 CXCL16Q9H2A7 254 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 IGFLR1Q9H665 355 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 TLR9Q9NR96 1032 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 RCOR1Q9UKL0 485 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 TNFSF13BQ9Y275 285 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 GIT1Q9Y2X7 761 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 PRG3Q9Y2Y8 225 aaPredicted RBP17.82■□□□□ 0.44
DDR1-246ENST00000485023 REV3LO60673 3130 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 ATG2AQ2TAZ0 1938 aa17.82■□□□□ 0.44
DDR1-246ENST00000485023 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.81■□□□□ 0.44
DDR1-246ENST00000485023 GALTP07902 379 aa17.81■□□□□ 0.44
DDR1-246ENST00000485023 IDEP14735 1019 aa17.81■□□□□ 0.44
DDR1-246ENST00000485023 GTF2F1P35269 517 aaKnown RBP eCLIP17.81■□□□□ 0.44
DDR1-246ENST00000485023 MATR3P43243 847 aaKnown RBP eCLIP17.81■□□□□ 0.44
DDR1-246ENST00000485023 ERVFC1P60507 584 aa17.81■□□□□ 0.44
DDR1-246ENST00000485023 PLPP4Q5VZY2 271 aa17.81■□□□□ 0.44
DDR1-246ENST00000485023 RBM23Q86U06 439 aaKnown RBP17.81■□□□□ 0.44
DDR1-246ENST00000485023 LEO1Q8WVC0 666 aaPredicted RBP17.81■□□□□ 0.44
DDR1-246ENST00000485023 RSPH1Q8WYR4 309 aa17.81■□□□□ 0.44
DDR1-246ENST00000485023 TMEM169Q96HH4 297 aa17.81■□□□□ 0.44
DDR1-246ENST00000485023 ZBTB45Q96K62 511 aaPredicted RBP17.81■□□□□ 0.44
DDR1-246ENST00000485023 TCF25Q9BQ70 676 aa17.81■□□□□ 0.44
DDR1-246ENST00000485023 ENTPD7Q9NQZ7 604 aa17.81■□□□□ 0.44
DDR1-246ENST00000485023 FAM13BQ9NYF5 915 aa17.81■□□□□ 0.44
DDR1-246ENST00000485023 TBC1D7Q9P0N9 293 aa17.81■□□□□ 0.44
DDR1-246ENST00000485023 KANSL3Q9P2N6 904 aa17.81■□□□□ 0.44
DDR1-246ENST00000485023 CACNG4Q9UBN1 327 aa17.81■□□□□ 0.44
DDR1-246ENST00000485023 H0YCG3 227 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 OR1G1P47890 313 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 PLCB3Q01970 1234 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 KRT17Q04695 432 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 UBE3AQ05086 875 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 E2F4Q16254 413 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 SEZ6Q53EL9 994 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 ZC2HC1CQ53FD0 456 aaPredicted RBP17.8■□□□□ 0.44
DDR1-246ENST00000485023 GLRA4Q5JXX5 417 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 RESP18Q5W5W9 173 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 MPZL3Q6UWV2 235 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 APBB1IPQ7Z5R6 666 aaPredicted RBP17.8■□□□□ 0.44
DDR1-246ENST00000485023 RABGGTAQ92696 567 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 GDPD2Q9HCC8 539 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 PTPRHQ9HD43 1115 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 PUF60Q9UHX1 559 aaKnown RBP17.8■□□□□ 0.44
DDR1-246ENST00000485023 KCNG1Q9UIX4 513 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 PRUNE2Q8WUY3 3088 aa17.8■□□□□ 0.44
DDR1-246ENST00000485023 F8W810 466 aa17.79■□□□□ 0.44
DDR1-246ENST00000485023 HNRNPDLO14979 420 aaKnown RBP17.79■□□□□ 0.44
DDR1-246ENST00000485023 INPPL1O15357 1258 aa17.79■□□□□ 0.44
DDR1-246ENST00000485023 POLR2DO15514 142 aaKnown RBP17.79■□□□□ 0.44
DDR1-246ENST00000485023 NRIP1P48552 1158 aa17.79■□□□□ 0.44
DDR1-246ENST00000485023 HYAL1Q12794 435 aa17.79■□□□□ 0.44
DDR1-246ENST00000485023 GSTCDQ8NEC7 633 aa17.79■□□□□ 0.44
DDR1-246ENST00000485023 HLA-CQ95604 372 aa17.79■□□□□ 0.44
DDR1-246ENST00000485023 DNAJC19Q96DA6 116 aa17.79■□□□□ 0.44
DDR1-246ENST00000485023 IGSF21Q96ID5 467 aa17.79■□□□□ 0.44
DDR1-246ENST00000485023 FIZ1Q96SL8 496 aa17.79■□□□□ 0.44
DDR1-246ENST00000485023 CLDND1Q9NY35 253 aa17.79■□□□□ 0.44
DDR1-246ENST00000485023 TBX20Q9UMR3 447 aa17.79■□□□□ 0.44
DDR1-246ENST00000485023 FAN1Q9Y2M0 1017 aa17.79■□□□□ 0.44
DDR1-246ENST00000485023 ATP6V1DQ9Y5K8 247 aa17.79■□□□□ 0.44
DDR1-246ENST00000485023 MYH11P35749 1972 aa17.79■□□□□ 0.44
DDR1-246ENST00000485023 ABLIM1O14639 778 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 PTGESO14684 152 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 NRP1O14786 923 aa17.78■□□□□ 0.44
DDR1-246ENST00000485023 PER2O15055 1255 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms