RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 C7orf25Q9BPX7 421 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 TCHPQ9BT92 498 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 APOL6Q9BWW8 343 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 TRIM9Q9C026 710 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 RNF39Q9H2S5 420 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 GDPD2Q9HCC8 539 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 OLFML3Q9NRN5 406 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 PANK4Q9NVE7 773 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 TBC1D13Q9NVG8 400 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 PARP2Q9UGN5 583 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 TBX20Q9UMR3 447 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 HES2Q9Y543 173 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 MTCH2Q9Y6C9 303 aa18.2■□□□□ 0.5
HMGN1-214ENST00000482733 GOLGA6L4A6NEF3 574 aa18.19■□□□□ 0.5
HMGN1-214ENST00000482733 ARL5CA6NH57 179 aa18.19■□□□□ 0.5
HMGN1-214ENST00000482733 MCF2P10911 925 aa18.19■□□□□ 0.5
HMGN1-214ENST00000482733 PROZP22891 400 aa18.19■□□□□ 0.5
HMGN1-214ENST00000482733 SYKP43405 635 aa18.19■□□□□ 0.5
HMGN1-214ENST00000482733 ALCAMQ13740 583 aa18.19■□□□□ 0.5
HMGN1-214ENST00000482733 ZNF568Q3ZCX4 644 aa18.19■□□□□ 0.5
HMGN1-214ENST00000482733 KCNT2Q6UVM3 1135 aa18.19■□□□□ 0.5
HMGN1-214ENST00000482733 MPZL3Q6UWV2 235 aa18.19■□□□□ 0.5
HMGN1-214ENST00000482733 ZNF720Q7Z2F6 126 aa18.19■□□□□ 0.5
HMGN1-214ENST00000482733 STAMQ92783 540 aa18.19■□□□□ 0.5
HMGN1-214ENST00000482733 BICD1Q96G01 975 aa18.19■□□□□ 0.5
HMGN1-214ENST00000482733 FAM193BQ96PV7 902 aaPredicted RBP18.19■□□□□ 0.5
HMGN1-214ENST00000482733 GAD1Q99259 594 aa18.19■□□□□ 0.5
HMGN1-214ENST00000482733 MRPL44Q9H9J2 332 aaKnown RBP18.19■□□□□ 0.5
HMGN1-214ENST00000482733 PLAGL2Q9UPG8 496 aa18.19■□□□□ 0.5
HMGN1-214ENST00000482733 PIGRP01833 764 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 AKAP5P24588 427 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 NMT1P30419 496 aaKnown RBP18.18■□□□□ 0.5
HMGN1-214ENST00000482733 MLH1P40692 756 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 ALDH7A1P49419 539 aaKnown RBP18.18■□□□□ 0.5
HMGN1-214ENST00000482733 LIG4P49917 911 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 ASIC1P78348 528 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 UBE3AQ05086 875 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 MAP4K3Q8IVH8 894 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 THNSL1Q8IYQ7 743 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 FSIP1Q8NA03 581 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 KLHL23Q8NBE8 558 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 MAFAQ8NHW3 353 aaPredicted RBP18.18■□□□□ 0.5
HMGN1-214ENST00000482733 MRPL38Q96DV4 380 aaKnown RBP18.18■□□□□ 0.5
HMGN1-214ENST00000482733 CDT1Q9H211 546 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 SNTG2Q9NY99 539 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 HCSTQ9UBK5 93 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 SERTAD1Q9UHV2 236 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 PCDHB13Q9Y5F0 798 aa18.18■□□□□ 0.5
HMGN1-214ENST00000482733 HNRNPDLO14979 420 aaKnown RBP18.17■□□□□ 0.5
HMGN1-214ENST00000482733 CLDN3O15551 220 aa18.17■□□□□ 0.5
HMGN1-214ENST00000482733 ACTN4O43707 911 aaKnown RBP18.17■□□□□ 0.5
HMGN1-214ENST00000482733 POMCP01189 267 aa18.17■□□□□ 0.5
HMGN1-214ENST00000482733 MYL1P05976 194 aa18.17■□□□□ 0.5
HMGN1-214ENST00000482733 GRM5P41594 1212 aa18.17■□□□□ 0.5
HMGN1-214ENST00000482733 BCAR1P56945 870 aa18.17■□□□□ 0.5
HMGN1-214ENST00000482733 PLCB3Q01970 1234 aa18.17■□□□□ 0.5
HMGN1-214ENST00000482733 STXBP4Q6ZWJ1 553 aa18.17■□□□□ 0.5
HMGN1-214ENST00000482733 RPS6KC1Q96S38 1066 aa18.17■□□□□ 0.5
HMGN1-214ENST00000482733 TMEM175Q9BSA9 504 aa18.17■□□□□ 0.5
HMGN1-214ENST00000482733 CCDC94Q9BW85 323 aaPredicted RBP18.17■□□□□ 0.5
HMGN1-214ENST00000482733 NRDE2Q9H7Z3 1164 aa18.17■□□□□ 0.5
HMGN1-214ENST00000482733 SPG21Q9NZD8 308 aa18.17■□□□□ 0.5
HMGN1-214ENST00000482733 EXOC7Q9UPT5 735 aa18.17■□□□□ 0.5
HMGN1-214ENST00000482733 PVALEFA0A1B0GWK0 134 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 ABLIM1O14639 778 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 ZC3H11AO75152 810 aaKnown RBP eCLIP18.16■□□□□ 0.5
HMGN1-214ENST00000482733 PPP1R37O75864 691 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 FGF18O76093 207 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 RECQL4O94761 1208 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 ITGB1P05556 798 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 NDUFA8P51970 172 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 YARSP54577 528 aaKnown RBP18.16■□□□□ 0.5
HMGN1-214ENST00000482733 KRT17Q04695 432 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 MCL1Q07820 350 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 GRIK3Q13003 919 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 COASYQ13057 564 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 NOLC1Q14978 699 aaKnown RBP eCLIP18.16■□□□□ 0.5
HMGN1-214ENST00000482733 KYAT1Q16773 422 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 TIGD5Q53EQ6 642 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 UNC13DQ70J99 1090 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 ZBTB33Q86T24 672 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 SPPL3Q8TCT6 385 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 PAGE5Q96GU1 130 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 CCDC34Q96HJ3 373 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 ZFP42Q96MM3 310 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 STRA6Q9BX79 667 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 ALG13Q9NP73 1137 aaKnown RBP18.16■□□□□ 0.5
HMGN1-214ENST00000482733 TOPORSQ9NS56 1045 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-214ENST00000482733 ANKFY1Q9P2R3 1169 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 PUF60Q9UHX1 559 aaKnown RBP18.16■□□□□ 0.5
HMGN1-214ENST00000482733 LZTS1Q9Y250 596 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 RALGAPA2Q2PPJ7 1873 aa18.16■□□□□ 0.5
HMGN1-214ENST00000482733 FNDC1Q4ZHG4 1894 aaPredicted RBP18.16■□□□□ 0.5
HMGN1-214ENST00000482733 TRANK1O15050 2925 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 GRM6O15303 877 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 NR1I2O75469 434 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 GCNT3O95395 438 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 ALDH2P05091 517 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 GALTP07902 379 aa18.15■□□□□ 0.5
HMGN1-214ENST00000482733 MATR3P43243 847 aaKnown RBP eCLIP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms