RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 GTF2BQ00403 316 aa22.94■■□□□ 1.26
SEC13-217ENST00000482647 RNASELQ05823 741 aaKnown RBP22.94■■□□□ 1.26
SEC13-217ENST00000482647 GPM6BQ13491 265 aa22.94■■□□□ 1.26
SEC13-217ENST00000482647 CSPP1Q1MSJ5 1256 aa22.94■■□□□ 1.26
SEC13-217ENST00000482647 ZNF720Q7Z2F6 126 aa22.94■■□□□ 1.26
SEC13-217ENST00000482647 GDPD5Q8WTR4 605 aa22.94■■□□□ 1.26
SEC13-217ENST00000482647 BICD1Q96G01 975 aa22.94■■□□□ 1.26
SEC13-217ENST00000482647 PARP2Q9UGN5 583 aa22.94■■□□□ 1.26
SEC13-217ENST00000482647 SERTAD1Q9UHV2 236 aa22.94■■□□□ 1.26
SEC13-217ENST00000482647 ARL5CA6NH57 179 aa22.93■■□□□ 1.26
SEC13-217ENST00000482647 POU3F3P20264 500 aaPredicted RBP22.93■■□□□ 1.26
SEC13-217ENST00000482647 ASIC1P78348 528 aa22.93■■□□□ 1.26
SEC13-217ENST00000482647 ZNF568Q3ZCX4 644 aa22.93■■□□□ 1.26
SEC13-217ENST00000482647 P2RX5Q93086 422 aa22.93■■□□□ 1.26
SEC13-217ENST00000482647 GAD1Q99259 594 aa22.93■■□□□ 1.26
SEC13-217ENST00000482647 OLFML3Q9NRN5 406 aa22.93■■□□□ 1.26
SEC13-217ENST00000482647 TBC1D13Q9NVG8 400 aa22.93■■□□□ 1.26
SEC13-217ENST00000482647 LMCD1Q9NZU5 365 aa22.93■■□□□ 1.26
SEC13-217ENST00000482647 ACTN4O43707 911 aaKnown RBP22.92■■□□□ 1.26
SEC13-217ENST00000482647 LPXNO60711 386 aa22.92■■□□□ 1.26
SEC13-217ENST00000482647 MCF2P10911 925 aa22.92■■□□□ 1.26
SEC13-217ENST00000482647 PROZP22891 400 aa22.92■■□□□ 1.26
SEC13-217ENST00000482647 AFMP43652 599 aa22.92■■□□□ 1.26
SEC13-217ENST00000482647 ZC2HC1CQ53FD0 456 aaPredicted RBP22.92■■□□□ 1.26
SEC13-217ENST00000482647 MPZL3Q6UWV2 235 aa22.92■■□□□ 1.26
SEC13-217ENST00000482647 ZBTB33Q86T24 672 aa22.92■■□□□ 1.26
SEC13-217ENST00000482647 COLGALT1Q8NBJ5 622 aa22.92■■□□□ 1.26
SEC13-217ENST00000482647 HVCN1Q96D96 273 aa22.92■■□□□ 1.26
SEC13-217ENST00000482647 PAGE5Q96GU1 130 aa22.92■■□□□ 1.26
SEC13-217ENST00000482647 SNTG2Q9NY99 539 aa22.92■■□□□ 1.26
SEC13-217ENST00000482647 TBC1D7Q9P0N9 293 aa22.92■■□□□ 1.26
SEC13-217ENST00000482647 HCSTQ9UBK5 93 aa22.92■■□□□ 1.26
SEC13-217ENST00000482647 ZMYM2Q9UBW7 1377 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 CARNS1A5YM72 827 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 HNRNPDLO14979 420 aaKnown RBP22.91■■□□□ 1.26
SEC13-217ENST00000482647 INPPL1O15357 1258 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 CLDN3O15551 220 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 POMCP01189 267 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 MLH1P40692 756 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 ALDH7A1P49419 539 aaKnown RBP22.91■■□□□ 1.26
SEC13-217ENST00000482647 LIG4P49917 911 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 AFF1P51825 1210 aaKnown RBP22.91■■□□□ 1.26
SEC13-217ENST00000482647 PTPROQ16827 1216 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 KLHL23Q8NBE8 558 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 ZFP42Q96MM3 310 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 ZNF558Q96NG5 402 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 FAM193BQ96PV7 902 aaPredicted RBP22.91■■□□□ 1.26
SEC13-217ENST00000482647 CDT1Q9H211 546 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 ANKFY1Q9P2R3 1169 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 PLAGL2Q9UPG8 496 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 PCDHB13Q9Y5F0 798 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 MTCH2Q9Y6C9 303 aa22.91■■□□□ 1.26
SEC13-217ENST00000482647 MYO9BQ13459 2157 aa22.9■■□□□ 1.26
SEC13-217ENST00000482647 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.9■■□□□ 1.26
SEC13-217ENST00000482647 PIGRP01833 764 aa22.9■■□□□ 1.26
SEC13-217ENST00000482647 MATR3P43243 847 aaKnown RBP eCLIP22.9■■□□□ 1.26
SEC13-217ENST00000482647 COASYQ13057 564 aa22.9■■□□□ 1.26
SEC13-217ENST00000482647 ALCAMQ13740 583 aa22.9■■□□□ 1.26
SEC13-217ENST00000482647 KCNT2Q6UVM3 1135 aa22.9■■□□□ 1.26
SEC13-217ENST00000482647 MAP4K3Q8IVH8 894 aa22.9■■□□□ 1.26
SEC13-217ENST00000482647 THNSL1Q8IYQ7 743 aa22.9■■□□□ 1.26
SEC13-217ENST00000482647 ZBTB45Q96K62 511 aaPredicted RBP22.9■■□□□ 1.26
SEC13-217ENST00000482647 CCDC94Q9BW85 323 aaPredicted RBP22.9■■□□□ 1.26
SEC13-217ENST00000482647 BLZF1Q9H2G9 400 aa22.9■■□□□ 1.26
SEC13-217ENST00000482647 GOLPH3LQ9H4A5 285 aa22.9■■□□□ 1.26
SEC13-217ENST00000482647 TSHZ2Q9NRE2 1034 aa22.9■■□□□ 1.26
SEC13-217ENST00000482647 KLK14Q9P0G3 267 aa22.9■■□□□ 1.26
SEC13-217ENST00000482647 GDAQ9Y2T3 454 aa22.9■■□□□ 1.26
SEC13-217ENST00000482647 PVALEFA0A1B0GWK0 134 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 ABLIM1O14639 778 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 ZC3H11AO75152 810 aaKnown RBP eCLIP22.89■■□□□ 1.25
SEC13-217ENST00000482647 RECQL4O94761 1208 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 GCNT3O95395 438 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 MYL1P05976 194 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 PPM1AP35813 382 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 GRM5P41594 1212 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 BCAR1P56945 870 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 MCL1Q07820 350 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 NOLC1Q14978 699 aaKnown RBP eCLIP22.89■■□□□ 1.25
SEC13-217ENST00000482647 STXBP4Q6ZWJ1 553 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 UNC13DQ70J99 1090 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 GRAMD1CQ8IYS0 662 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 IPO9Q96P70 1041 aaKnown RBP22.89■■□□□ 1.25
SEC13-217ENST00000482647 STRA6Q9BX79 667 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 GBP3Q9H0R5 595 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 LMAN2LQ9H0V9 348 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 NRDE2Q9H7Z3 1164 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 ALG13Q9NP73 1137 aaKnown RBP22.89■■□□□ 1.25
SEC13-217ENST00000482647 SPG21Q9NZD8 308 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 EXOC7Q9UPT5 735 aa22.89■■□□□ 1.25
SEC13-217ENST00000482647 COL6A3P12111 3177 aa22.88■■□□□ 1.25
SEC13-217ENST00000482647 GRM6O15303 877 aa22.88■■□□□ 1.25
SEC13-217ENST00000482647 PPP1R37O75864 691 aa22.88■■□□□ 1.25
SEC13-217ENST00000482647 FGF18O76093 207 aa22.88■■□□□ 1.25
SEC13-217ENST00000482647 ZNF202O95125 648 aa22.88■■□□□ 1.25
SEC13-217ENST00000482647 SLC34A2O95436 690 aa22.88■■□□□ 1.25
SEC13-217ENST00000482647 ITGB1P05556 798 aa22.88■■□□□ 1.25
SEC13-217ENST00000482647 HARSP12081 509 aaKnown RBP22.88■■□□□ 1.25
SEC13-217ENST00000482647 SCNN1GP51170 649 aa22.88■■□□□ 1.25
SEC13-217ENST00000482647 YARSP54577 528 aaKnown RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms