RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 SGO2Q562F6 1265 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 RFX6Q8HWS3 928 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 PPP1R14CQ8TAE6 165 aa20.63■□□□□ 0.89
CCM2-214ENST00000481194 SPATA31C2B4DYI2 1134 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 REPS2Q8NFH8 660 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 ASNSD1Q9NWL6 643 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 H3BRB1 525 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 RWDD2BP57060 319 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 LBX2Q6XYB7 198 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 HAS1Q92839 578 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 TUT1Q9H6E5 874 aaKnown RBP20.62■□□□□ 0.89
CCM2-214ENST00000481194 ADGRG1Q9Y653 693 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 TYW5A2RUC4 315 aaKnown RBP20.62■□□□□ 0.89
CCM2-214ENST00000481194 ELF1P32519 619 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 NLRP11P59045 1033 aaKnown RBP20.62■□□□□ 0.89
CCM2-214ENST00000481194 FAM110CQ1W6H9 321 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 SV2CQ496J9 727 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 TINF2Q9BSI4 451 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 RSPH10B2B2RC85 870 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 RSPH10BP0C881 870 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 DHX38Q92620 1227 aaKnown RBP20.62■□□□□ 0.89
CCM2-214ENST00000481194 FAM114A2Q9NRY5 505 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 BLOC1S4Q9NUP1 217 aa20.62■□□□□ 0.89
CCM2-214ENST00000481194 TOM1L1O75674 476 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 MAP2K5Q13163 448 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 TREML2Q5T2D2 321 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 MSL3Q8N5Y2 521 aaKnown RBP20.61■□□□□ 0.89
CCM2-214ENST00000481194 ETNPPLQ8TBG4 499 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 MTMR8Q96EF0 704 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 ZNF410Q86VK4 478 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 TARS2Q9BW92 718 aaKnown RBP20.61■□□□□ 0.89
CCM2-214ENST00000481194 DONSONQ9NYP3 566 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 TRAF3IP3Q9Y228 551 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 A6NNZ2 444 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 RTN2O75298 545 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 CD44P16070 742 aaKnown RBP20.61■□□□□ 0.89
CCM2-214ENST00000481194 UBA1P22314 1058 aaKnown RBP20.61■□□□□ 0.89
CCM2-214ENST00000481194 IFRD2Q12894 506 aaPredicted RBP20.61■□□□□ 0.89
CCM2-214ENST00000481194 TUBB8Q3ZCM7 444 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 RNF139Q8WU17 664 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 SCFD1Q8WVM8 642 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 RBM41Q96IZ5 413 aaKnown RBP20.61■□□□□ 0.89
CCM2-214ENST00000481194 APBA2Q99767 749 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 SLC45A1Q9Y2W3 748 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 ATF2P15336 505 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 KLRC1P26715 233 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 FIGNQ5HY92 759 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 HYIQ5T013 277 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 LGSNQ5TDP6 509 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 GPR142Q7Z601 462 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 TRIM31Q9BZY9 425 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 MTIF3Q9H2K0 278 aaKnown RBP20.61■□□□□ 0.89
CCM2-214ENST00000481194 TACC3Q9Y6A5 838 aa20.61■□□□□ 0.89
CCM2-214ENST00000481194 SART1O43290 800 aaKnown RBP20.6■□□□□ 0.89
CCM2-214ENST00000481194 ZNF189O75820 626 aaPredicted RBP20.6■□□□□ 0.89
CCM2-214ENST00000481194 GFPT1Q06210 699 aaPredicted RBP20.6■□□□□ 0.89
CCM2-214ENST00000481194 SH3D19Q5HYK7 790 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 CLMNQ96JQ2 1002 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 IP6K2Q9UHH9 426 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 AGAP1Q9UPQ3 857 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 TMEM88BA6NKF7 163 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 M0QYV0 167 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 BZW1Q7L1Q6 419 aaKnown RBP20.6■□□□□ 0.89
CCM2-214ENST00000481194 ZBED2Q9BTP6 218 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 FAM107BQ9H098 131 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 ABL1P00519 1130 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 PSMA2P25787 234 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 CDKAL1Q5VV42 579 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 TLK2Q86UE8 772 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 GCNAQ96QF7 691 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 A8MXQ7 604 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 RFFLQ8WZ73 363 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 P3H4Q92791 437 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 SNCAIPQ9Y6H5 919 aa20.6■□□□□ 0.89
CCM2-214ENST00000481194 DDX60Q8IY21 1712 aaKnown RBP20.59■□□□□ 0.89
CCM2-214ENST00000481194 N4BP2Q86UW6 1770 aaPredicted RBP20.59■□□□□ 0.89
CCM2-214ENST00000481194 MSCO60682 206 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 CABYRO75952 493 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 HLA-DRAP01903 254 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 ADCY8P40145 1251 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 GRIK4Q16099 956 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 PLPPR4Q7Z2D5 763 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 APPL2Q8NEU8 664 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 SEMA6BQ9H3T3 888 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 UBQLN1Q9UMX0 589 aaKnown RBP20.59■□□□□ 0.89
CCM2-214ENST00000481194 GTPBP10A4D1E9 387 aaKnown RBP20.59■□□□□ 0.89
CCM2-214ENST00000481194 PPP1R11O60927 126 aaPredicted RBP20.59■□□□□ 0.89
CCM2-214ENST00000481194 PSMC4P43686 418 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 BFSP2Q13515 415 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 TAF2Q6P1X5 1199 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 PKNOX2Q96KN3 472 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 WDR35Q9P2L0 1181 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 LYPLA2O95372 231 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 AXLP30530 894 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 ARID5BQ14865 1188 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 DEFB115Q30KQ5 88 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 NIF3L1Q9GZT8 377 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 EML1O00423 815 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 FTCDO95954 541 aa20.59■□□□□ 0.89
CCM2-214ENST00000481194 PHBP35232 272 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms