RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 PAPLNO95428 1278 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 FOSL2P15408 326 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 SMARCA1P28370 1054 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 ST13P50502 369 aaKnown RBP7.27□□□□□ -1.25
HOXB3-209ENST00000478644 RPS6P62753 249 aaKnown RBP7.27□□□□□ -1.25
HOXB3-209ENST00000478644 CCDC85BQ15834 202 aaPredicted RBP7.27□□□□□ -1.25
HOXB3-209ENST00000478644 NKPD1Q17RQ9 610 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 MUM1L1Q5H9M0 696 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 TMEM240Q5SV17 173 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 IFIT1BQ5T764 474 aaKnown RBP7.27□□□□□ -1.25
HOXB3-209ENST00000478644 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.27□□□□□ -1.25
HOXB3-209ENST00000478644 Q7L0L9 218 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 ATG4DQ86TL0 474 aaPredicted RBP7.27□□□□□ -1.25
HOXB3-209ENST00000478644 SESTD1Q86VW0 696 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 MFSD2AQ8NA29 543 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 OR6J1Q8NGC5 347 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 MAFAQ8NHW3 353 aaPredicted RBP7.27□□□□□ -1.25
HOXB3-209ENST00000478644 TIFAQ96CG3 184 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 GUCD1Q96NT3 240 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 MAP3K14Q99558 947 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 LZTS2Q9BRK4 669 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 AMNQ9BXJ7 453 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 FOXQ1Q9C009 403 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 ALDH8A1Q9H2A2 487 aaPredicted RBP7.27□□□□□ -1.25
HOXB3-209ENST00000478644 SLC28A3Q9HAS3 691 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 MAPK8IP1Q9UQF2 711 aa7.27□□□□□ -1.25
HOXB3-209ENST00000478644 NMT2O60551 498 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 PPFIA4O75335 1185 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 SLITRK5O94991 958 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 GH1P01241 217 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 RPLP2P05387 115 aaKnown RBP7.26□□□□□ -1.25
HOXB3-209ENST00000478644 TXNP10599 105 aaKnown RBP7.26□□□□□ -1.25
HOXB3-209ENST00000478644 CSF2RAP15509 400 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 CALML3P27482 149 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 SLC16A2P36021 539 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 GNAQP50148 359 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 HAND2P61296 217 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 PURAQ00577 322 aaKnown RBP7.26□□□□□ -1.25
HOXB3-209ENST00000478644 GHRHRQ02643 423 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 PTH1RQ03431 593 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 CDC37Q16543 378 aaPredicted RBP7.26□□□□□ -1.25
HOXB3-209ENST00000478644 DGKDQ16760 1214 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 AAK1Q2M2I8 961 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 ARHGEF16Q5VV41 709 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 XRRA1Q6P2D8 792 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 CXCL17Q6UXB2 119 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 SKAP1Q86WV1 359 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 TBC1D10CQ8IV04 446 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 AFAP1L1Q8TED9 768 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 UBE2Q2Q8WVN8 375 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 ATXN2LQ8WWM7 1075 aaKnown RBP7.26□□□□□ -1.25
HOXB3-209ENST00000478644 ASB11Q8WXH4 323 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 CLEC4DQ8WXI8 215 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 MAP4K1Q92918 833 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 TNPO1Q92973 898 aaKnown RBP7.26□□□□□ -1.25
HOXB3-209ENST00000478644 SLC9A7Q96T83 725 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 RMDN3Q96TC7 470 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.26□□□□□ -1.25
HOXB3-209ENST00000478644 NOC4LQ9BVI4 516 aaKnown RBP7.26□□□□□ -1.25
HOXB3-209ENST00000478644 FBRSQ9HAH7 460 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 MBNL3Q9NUK0 354 aaKnown RBP7.26□□□□□ -1.25
HOXB3-209ENST00000478644 ZSWIM5Q9P217 1185 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 PARP2Q9UGN5 583 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 PCDHA11Q9Y5I1 949 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 SLC4A7Q9Y6M7 1214 aa7.26□□□□□ -1.25
HOXB3-209ENST00000478644 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.25□□□□□ -1.25
HOXB3-209ENST00000478644 BIN1O00499 593 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 NFIBO00712 420 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 ZBTB5O15062 677 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 DHX16O60231 1041 aaKnown RBP7.25□□□□□ -1.25
HOXB3-209ENST00000478644 RNASE1P07998 156 aaKnown RBP7.25□□□□□ -1.25
HOXB3-209ENST00000478644 ITGB8P26012 769 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 KIF5BP33176 963 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 LIG3P49916 1009 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 CLCN7P51798 805 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 BEX3Q00994 111 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 GNPTABQ3T906 1256 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 WIPI1Q5MNZ9 446 aaPredicted RBP7.25□□□□□ -1.25
HOXB3-209ENST00000478644 SLC23A3Q6PIS1 610 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 ZNF662Q6ZS27 426 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 STOX1Q6ZVD7 989 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 ZNF365Q70YC5 407 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 RALYLQ86SE5 291 aaKnown RBP7.25□□□□□ -1.25
HOXB3-209ENST00000478644 HID1Q8IV36 788 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 FBXO16Q8IX29 292 aaPredicted RBP7.25□□□□□ -1.25
HOXB3-209ENST00000478644 ADGRF4Q8IZF3 695 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 ENAHQ8N8S7 591 aaPredicted RBP7.25□□□□□ -1.25
HOXB3-209ENST00000478644 GIMAP8Q8ND71 665 aaPredicted RBP7.25□□□□□ -1.25
HOXB3-209ENST00000478644 NCOA7Q8NI08 942 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 MICAL1Q8TDZ2 1067 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 LSG1Q9H089 658 aaKnown RBP7.25□□□□□ -1.25
HOXB3-209ENST00000478644 LMCD1Q9NZU5 365 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 ADAMTS6Q9UKP5 1117 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 PCDHB5Q9Y5E4 795 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 ASTN1O14525 1302 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 TNKSO95271 1327 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 FRMPD2Q68DX3 1309 aaPredicted RBP7.25□□□□□ -1.25
HOXB3-209ENST00000478644 EMSYQ7Z589 1322 aa7.25□□□□□ -1.25
HOXB3-209ENST00000478644 PRAMEF27A3QJZ7 478 aa7.24□□□□□ -1.25
HOXB3-209ENST00000478644 MYADML2A6NDP7 307 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms