RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-222ENST00000478279 GAD1Q99259 594 aa11.85□□□□□ -0.51
APTX-222ENST00000478279 MINDY3Q9H8M7 445 aa11.85□□□□□ -0.51
APTX-222ENST00000478279 LTB4R2Q9NPC1 389 aa11.85□□□□□ -0.51
APTX-222ENST00000478279 MIOSQ9NXC5 875 aa11.85□□□□□ -0.51
APTX-222ENST00000478279 CEP295Q9C0D2 2601 aa11.85□□□□□ -0.51
APTX-222ENST00000478279 FAM208BQ5VWN6 2430 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 CCDC196A0A1B0GTZ2 297 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 F8W810 466 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 SRGAP2CP0DJJ0 459 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 CREMQ03060 361 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 ZBTB41Q5SVQ8 909 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 FUT10Q6P4F1 479 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 GLYCTKQ8IVS8 523 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 PRPF31Q8WWY3 499 aaKnown RBP11.84□□□□□ -0.51
APTX-222ENST00000478279 FGF13Q92913 245 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 CLDN23Q96B33 292 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 B3GALT6Q96L58 329 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 NELL2Q99435 816 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 ESYT1Q9BSJ8 1104 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 GPR62Q9BZJ7 368 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 PARD6AQ9NPB6 346 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 IPPQ9Y573 584 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 COL4A3Q01955 1670 aa11.84□□□□□ -0.51
APTX-222ENST00000478279 TDRD15B5MCY1 1934 aaKnown RBP11.84□□□□□ -0.51
APTX-222ENST00000478279 NCAM2O15394 837 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 PRPF3O43395 683 aaKnown RBP11.83□□□□□ -0.52
APTX-222ENST00000478279 HNRNPA1P09651 372 aaKnown RBP eCLIP11.83□□□□□ -0.52
APTX-222ENST00000478279 RPL17P18621 184 aaKnown RBP11.83□□□□□ -0.52
APTX-222ENST00000478279 CD72P21854 359 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 TARSP26639 723 aaKnown RBP11.83□□□□□ -0.52
APTX-222ENST00000478279 MLH1P40692 756 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 SCNN1GP51170 649 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 PSMC5P62195 406 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 NTHL1P78549 312 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 LAMTOR4Q0VGL1 99 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 Q4G0T1 1027 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 RNF20Q5VTR2 975 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 PLA2G4FQ68DD2 849 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 EXOC8Q8IYI6 725 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 PSPC1Q8WXF1 523 aaKnown RBP11.83□□□□□ -0.52
APTX-222ENST00000478279 SLC7A3Q8WY07 619 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 CCDC51Q96ER9 411 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 FAM126AQ9BYI3 521 aaPredicted RBP11.83□□□□□ -0.52
APTX-222ENST00000478279 ANO2Q9NQ90 1003 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 FBXW11Q9UKB1 542 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 GMEB2Q9UKD1 530 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 ADAM28Q9UKQ2 775 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 NAP1L2Q9ULW6 460 aaPredicted RBP11.83□□□□□ -0.52
APTX-222ENST00000478279 GIT1Q9Y2X7 761 aa11.83□□□□□ -0.52
APTX-222ENST00000478279 CYP3A7-CYP3A51PA0A087WV96 503 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 ASAP2O43150 1006 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 CYP3A7P24462 503 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 AXLP30530 894 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 RPS9P46781 194 aaKnown RBP11.82□□□□□ -0.52
APTX-222ENST00000478279 NPEPPSP55786 919 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 AKAP17AQ02040 695 aaKnown RBP11.82□□□□□ -0.52
APTX-222ENST00000478279 PCBP1Q15365 356 aaKnown RBP eCLIP11.82□□□□□ -0.52
APTX-222ENST00000478279 LIN9Q5TKA1 542 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 NOTUMQ6P988 496 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 TSSK4Q6SA08 328 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 CCDC148Q8NFR7 591 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 TBCKQ8TEA7 893 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 TMEM143Q96AN5 459 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 CHAMP1Q96JM3 812 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 ZFP42Q96MM3 310 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 PHF20Q9BVI0 1012 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 EIF2AQ9BY44 585 aaKnown RBP11.82□□□□□ -0.52
APTX-222ENST00000478279 DHX33Q9H6R0 707 aaKnown RBP11.82□□□□□ -0.52
APTX-222ENST00000478279 PRMT8Q9NR22 394 aaPredicted RBP11.82□□□□□ -0.52
APTX-222ENST00000478279 HES2Q9Y543 173 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 PPME1Q9Y570 386 aa11.82□□□□□ -0.52
APTX-222ENST00000478279 SLC30A4O14863 429 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 DKC1O60832 514 aaKnown RBP eCLIP11.81□□□□□ -0.52
APTX-222ENST00000478279 XYLBO75191 536 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 TADA2AO75478 443 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 ERLIN2O94905 339 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 HOXA9P31269 272 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 QARSP47897 775 aaKnown RBP11.81□□□□□ -0.52
APTX-222ENST00000478279 NCBP1Q09161 790 aaKnown RBP11.81□□□□□ -0.52
APTX-222ENST00000478279 FZD5Q13467 585 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 TSGA10IPQ3SY00 556 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 PPM1JQ5JR12 505 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 PPM1LQ5SGD2 360 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 PRSS55Q6UWB4 352 aaPredicted RBP11.81□□□□□ -0.52
APTX-222ENST00000478279 ZNF852Q6ZMS4 543 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 TPRG1Q6ZUI0 275 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 ZNF579Q8NAF0 562 aaKnown RBP11.81□□□□□ -0.52
APTX-222ENST00000478279 RNF149Q8NC42 400 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 ITFG1Q8TB96 612 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 NETO1Q8TDF5 533 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 CEP170P1Q96L14 293 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 KXD1Q9BQD3 176 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 CLSTN3Q9BQT9 956 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 C22orf23Q9BZE7 217 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 CSRNP2Q9H175 543 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 RAB23Q9ULC3 237 aa11.81□□□□□ -0.52
APTX-222ENST00000478279 MRPS17Q9Y2R5 130 aaKnown RBP11.81□□□□□ -0.52
APTX-222ENST00000478279 CCL16O15467 120 aa11.8□□□□□ -0.52
APTX-222ENST00000478279 TSPAN1O60635 241 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms