RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 MRPL4Q9BYD3 311 aaKnown RBP11.24□□□□□ -0.61
CCM2-208ENST00000476594 CCDC113Q9H0I3 377 aa11.24□□□□□ -0.61
CCM2-208ENST00000476594 NXF3Q9H4D5 531 aaKnown RBP11.24□□□□□ -0.61
CCM2-208ENST00000476594 ODF2LQ9ULJ1 636 aa11.24□□□□□ -0.61
CCM2-208ENST00000476594 IRAK3Q9Y616 596 aa11.24□□□□□ -0.61
CCM2-208ENST00000476594 REV3LO60673 3130 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 SPDYE4A6NLX3 237 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 MEIS3P2A8K0S8 358 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 NRP1O14786 923 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 MBTPS2O43462 519 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 TBX10O75333 385 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 TBCAO75347 108 aaKnown RBP11.23□□□□□ -0.61
CCM2-208ENST00000476594 CXCL14O95715 111 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 PLS3P13797 630 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 IL9P15248 144 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 NPTX2P47972 431 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 CREMQ03060 361 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 COASYQ13057 564 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 IL17AQ16552 155 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 TMEM119Q4V9L6 283 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 KIAA1841Q6NSI8 718 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 C1orf186Q6ZWK4 172 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 FAM178BQ8IXR5 827 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 SPIRE2Q8WWL2 714 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 ZNF396Q96N95 335 aaPredicted RBP11.23□□□□□ -0.61
CCM2-208ENST00000476594 TCHPQ9BT92 498 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 RUSC1Q9BVN2 902 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 ZBP1Q9H171 429 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 PDZD7Q9H5P4 517 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 MRPL17Q9NRX2 175 aaKnown RBP11.23□□□□□ -0.61
CCM2-208ENST00000476594 DZANK1Q9NVP4 752 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 DNAJB4Q9UDY4 337 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 TNFSF13BQ9Y275 285 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 HES2Q9Y543 173 aa11.23□□□□□ -0.61
CCM2-208ENST00000476594 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.23□□□□□ -0.61
CCM2-208ENST00000476594 C2orf71A6NGG8 1288 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 PER2O15055 1255 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 DDHD2O94830 711 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 FAM13AO94988 1023 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 SOD2P04179 222 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 THP07101 528 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 AKAP5P24588 427 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 GTF2F1P35269 517 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCM2-208ENST00000476594 LTBRP36941 435 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 SLC12A3P55017 1021 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 ELAVL2Q12926 359 aaKnown RBP11.22□□□□□ -0.61
CCM2-208ENST00000476594 RESTQ13127 1097 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 TUSC3Q13454 348 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 SMAD2Q15796 467 aaKnown RBP11.22□□□□□ -0.61
CCM2-208ENST00000476594 CLUL1Q15846 466 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 ZNF568Q3ZCX4 644 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 CES5AQ6NT32 575 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 TMEM184AQ6ZMB5 413 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 GPBP1Q86WP2 473 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 CDR2LQ86X02 465 aaPredicted RBP11.22□□□□□ -0.61
CCM2-208ENST00000476594 ZNF280BQ86YH2 543 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 ADHFE1Q8IWW8 467 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 COLGALT2Q8IYK4 626 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 GJD3Q8N144 294 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 SMRP1Q8NCR6 262 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 LARP4BQ92615 738 aaKnown RBP11.22□□□□□ -0.61
CCM2-208ENST00000476594 ZFP42Q96MM3 310 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 PNMA5Q96PV4 448 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 PLIN2Q99541 437 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 KIFC3Q9BVG8 833 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 HERC2P3Q9BVR0 1158 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 C1QTNF1Q9BXJ1 281 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 CCSER1Q9C0I3 900 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCM2-208ENST00000476594 ARHGAP28Q9P2N2 729 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 STK17AQ9UEE5 414 aa11.22□□□□□ -0.61
CCM2-208ENST00000476594 BARX2Q9UMQ3 279 aaPredicted RBP11.22□□□□□ -0.61
CCM2-208ENST00000476594 PRG3Q9Y2Y8 225 aaPredicted RBP11.22□□□□□ -0.61
CCM2-208ENST00000476594 MORC2Q9Y6X9 1032 aaPredicted RBP11.22□□□□□ -0.61
CCM2-208ENST00000476594 TCF20Q9UGU0 1960 aaKnown RBP11.21□□□□□ -0.61
CCM2-208ENST00000476594 SF3B1O75533 1304 aaKnown RBP eCLIP11.21□□□□□ -0.614e-7■■■■■ 133.7
CCM2-208ENST00000476594 HIDE1A8MVS5 230 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 LINC01565O15544 149 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 RECQL4O94761 1208 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 ADH1AP07327 375 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 MCF2P10911 925 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 ALADP13716 330 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 MATR3P43243 847 aaKnown RBP eCLIP11.21□□□□□ -0.61
CCM2-208ENST00000476594 GLUD2P49448 558 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 ITIH3Q06033 890 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 DSC1Q08554 894 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 STK38Q15208 465 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 KYAT1Q16773 422 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 PDXDC1Q6P996 788 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 KCNK18Q7Z418 384 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 GPR65Q8IYL9 337 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 KRI1Q8N9T8 703 aaKnown RBP11.21□□□□□ -0.61
CCM2-208ENST00000476594 RAD54LQ92698 747 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 BICD1Q96G01 975 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 MSLNLQ96KJ4 702 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 UROC1Q96N76 676 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 NECTIN4Q96NY8 510 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 NTPCRQ9BSD7 190 aaKnown RBP11.21□□□□□ -0.61
CCM2-208ENST00000476594 PARVGQ9HBI0 331 aa11.21□□□□□ -0.61
CCM2-208ENST00000476594 SLC38A7Q9NVC3 462 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms