RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 LTA4HP09960 611 aaKnown RBP5.23□□□□□ -1.57
BRCA1-212ENST00000473961 ZKSCAN1P17029 563 aaPredicted RBP5.23□□□□□ -1.57
BRCA1-212ENST00000473961 EDNRBP24530 442 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 VIPR1P32241 457 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 SRSF3P84103 164 aaKnown RBP5.23□□□□□ -1.57
BRCA1-212ENST00000473961 CDC42EP1Q00587 391 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 RAPGEF1Q13905 1077 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 RAB39AQ14964 217 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 ATP2B3Q16720 1220 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 C3orf36Q3SXR2 165 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 TMEM200BQ69YZ2 307 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 B3GNT8Q7Z7M8 397 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 DPP9Q86TI2 863 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 RSPH3Q86UC2 560 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 UNC5BQ8IZJ1 945 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 STPG3Q8N7X2 389 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.23□□□□□ -1.57
BRCA1-212ENST00000473961 PARD3BQ8TEW8 1205 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 CCDC138Q96M89 665 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 PTPN18Q99952 460 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 BTBD1Q9H0C5 482 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 ARFGAP3Q9NP61 516 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 KCND1Q9NSA2 647 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.23□□□□□ -1.57
BRCA1-212ENST00000473961 TPCN1Q9ULQ1 816 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 NR2E3Q9Y5X4 410 aa5.23□□□□□ -1.57
BRCA1-212ENST00000473961 A0A088AWK7 358 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 RHPN2P1A8MT19 583 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 NPHP1O15259 732 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 PHGDHO43175 533 aaKnown RBP5.22□□□□□ -1.57
BRCA1-212ENST00000473961 AKAP8O43823 692 aaKnown RBP5.22□□□□□ -1.57
BRCA1-212ENST00000473961 PEX10O60683 326 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 TM4SF4P48230 202 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 ITGA1P56199 1179 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 WNT3AP56704 352 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 CHAF1AQ13111 956 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-212ENST00000473961 STK3Q13188 491 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 FGL2Q14314 439 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 TMEM132EQ6IEE7 984 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 GADL1Q6ZQY3 521 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 ZNF605Q86T29 641 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 FAM26EQ8N5C1 309 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 KYQ8NBH2 561 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 PPP1R14CQ8TAE6 165 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 SMARCC2Q8TAQ2 1214 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 ZNF480Q8WV37 535 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 SNX33Q8WV41 574 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 DPF2Q92785 391 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 LPPQ93052 612 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 ZC3H10Q96K80 434 aaKnown RBP5.22□□□□□ -1.57
BRCA1-212ENST00000473961 UIMC1Q96RL1 719 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 UHRF1Q96T88 793 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-212ENST00000473961 NAA15Q9BXJ9 866 aaKnown RBP5.22□□□□□ -1.57
BRCA1-212ENST00000473961 DMRT3Q9NQL9 472 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 CALCOCO1Q9P1Z2 691 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 RBPJLQ9UBG7 517 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 FEZ2Q9UHY8 353 aaPredicted RBP5.22□□□□□ -1.57
BRCA1-212ENST00000473961 PADI4Q9UM07 663 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 PCDHGB6Q9Y5F9 930 aa5.22□□□□□ -1.57
BRCA1-212ENST00000473961 A0A1W2PPL8 197 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 IL18BPO95998 194 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 FTH1P19P0C7X4 201 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 CTSSP25774 331 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 SMARCA1P28370 1054 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 MEOX1P50221 254 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 FXR1P51114 621 aaKnown RBP eCLIP5.21□□□□□ -1.58
BRCA1-212ENST00000473961 MAP2K6P52564 334 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 HK3P52790 923 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 RAB1AP62820 205 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 NOGQ13253 232 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 C19orf54Q5BKX5 351 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 RTKN2Q8IZC4 609 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 VPS37AQ8NEZ2 397 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 DEPTORQ8TB45 409 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 NSUN6Q8TEA1 469 aaKnown RBP5.21□□□□□ -1.58
BRCA1-212ENST00000473961 KAT5Q92993 513 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 FDXACB1Q9BRP7 624 aaPredicted RBP5.21□□□□□ -1.58
BRCA1-212ENST00000473961 BHMT2Q9H2M3 363 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 WDCPQ9H6R7 721 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 LMBRD1Q9NUN5 540 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 GNL3LQ9NVN8 582 aaKnown RBP5.21□□□□□ -1.58
BRCA1-212ENST00000473961 DNAI1Q9UI46 699 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 CROTQ9UKG9 612 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 LRCH1Q9Y2L9 728 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 SNX13Q9Y5W8 968 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 IRS2Q9Y4H2 1338 aa5.21□□□□□ -1.58
BRCA1-212ENST00000473961 A0A1W2PR48 441 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 RASA4BC9J798 803 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 H3BUI4 141 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 DDX3XO00571 662 aaKnown RBP eCLIP5.2□□□□□ -1.58
BRCA1-212ENST00000473961 TEX33O43247 280 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 RASA4O43374 803 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 SEMA7AO75326 666 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 LY86O95711 162 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 GASTP01350 101 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 HMGCRP04035 888 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 SLC5A1P13866 664 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 FBLN1P23142 703 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 ADCY8P40145 1251 aa5.2□□□□□ -1.58
BRCA1-212ENST00000473961 ALDH5A1P51649 535 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms