RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 HSP90AA2PQ14568 343 aaPredicted RBP16.71■□□□□ 0.27
COMMD6-208ENST00000471682 NOLC1Q14978 699 aaKnown RBP eCLIP16.71■□□□□ 0.27
COMMD6-208ENST00000471682 CAMK4Q16566 473 aa16.71■□□□□ 0.27
COMMD6-208ENST00000471682 KNOP1Q1ED39 458 aaKnown RBP16.71■□□□□ 0.27
COMMD6-208ENST00000471682 GLIS3Q8NEA6 775 aa16.71■□□□□ 0.27
COMMD6-208ENST00000471682 CDT1Q9H211 546 aa16.71■□□□□ 0.27
COMMD6-208ENST00000471682 RC3H2Q9HBD1 1191 aaKnown RBP16.71■□□□□ 0.27
COMMD6-208ENST00000471682 GIT1Q9Y2X7 761 aa16.71■□□□□ 0.27
COMMD6-208ENST00000471682 COL4A6Q14031 1691 aa16.71■□□□□ 0.27
COMMD6-208ENST00000471682 ITGA4P13612 1032 aa16.7■□□□□ 0.26
COMMD6-208ENST00000471682 HOXD13P35453 343 aa16.7■□□□□ 0.26
COMMD6-208ENST00000471682 GRM5P41594 1212 aa16.7■□□□□ 0.26
COMMD6-208ENST00000471682 MORC3Q14149 939 aa16.7■□□□□ 0.26
COMMD6-208ENST00000471682 RAB30Q15771 203 aa16.7■□□□□ 0.26
COMMD6-208ENST00000471682 SLC39A4Q6P5W5 647 aa16.7■□□□□ 0.26
COMMD6-208ENST00000471682 RBM43Q6ZSC3 357 aaKnown RBP16.7■□□□□ 0.26
COMMD6-208ENST00000471682 HS2ST1Q7LGA3 356 aa16.7■□□□□ 0.26
COMMD6-208ENST00000471682 CDR2LQ86X02 465 aaPredicted RBP16.7■□□□□ 0.26
COMMD6-208ENST00000471682 C12orf56Q8IXR9 622 aa16.7■□□□□ 0.26
COMMD6-208ENST00000471682 ZNF689Q96CS4 500 aaPredicted RBP16.7■□□□□ 0.26
COMMD6-208ENST00000471682 TMEM117Q9H0C3 514 aa16.7■□□□□ 0.26
COMMD6-208ENST00000471682 MAN1B1Q9UKM7 699 aa16.7■□□□□ 0.26
COMMD6-208ENST00000471682 USP20Q9Y2K6 914 aa16.7■□□□□ 0.26
COMMD6-208ENST00000471682 PCDHA11Q9Y5I1 949 aa16.7■□□□□ 0.26
COMMD6-208ENST00000471682 TRIOBPQ9H2D6 2365 aa16.7■□□□□ 0.26
COMMD6-208ENST00000471682 RANBP2P49792 3224 aaKnown RBP16.7■□□□□ 0.26
COMMD6-208ENST00000471682 PDXKO00764 312 aa16.69■□□□□ 0.26
COMMD6-208ENST00000471682 LDHAP00338 332 aaKnown RBP16.69■□□□□ 0.26
COMMD6-208ENST00000471682 KLHL40Q2TBA0 621 aa16.69■□□□□ 0.26
COMMD6-208ENST00000471682 SKOR2Q2VWA4 1001 aaPredicted RBP16.69■□□□□ 0.26
COMMD6-208ENST00000471682 AGMOQ6ZNB7 445 aa16.69■□□□□ 0.26
COMMD6-208ENST00000471682 CMTR2Q8IYT2 770 aaKnown RBP16.69■□□□□ 0.26
COMMD6-208ENST00000471682 SP7Q8TDD2 431 aaPredicted RBP16.69■□□□□ 0.26
COMMD6-208ENST00000471682 SYAP1Q96A49 352 aaPredicted RBP16.69■□□□□ 0.26
COMMD6-208ENST00000471682 ZBTB45Q96K62 511 aaPredicted RBP16.69■□□□□ 0.26
COMMD6-208ENST00000471682 ZBED2Q9BTP6 218 aa16.69■□□□□ 0.26
COMMD6-208ENST00000471682 CCDC94Q9BW85 323 aaPredicted RBP16.69■□□□□ 0.26
COMMD6-208ENST00000471682 KCTD10Q9H3F6 313 aa16.69■□□□□ 0.26
COMMD6-208ENST00000471682 RSAD1Q9HA92 442 aa16.69■□□□□ 0.26
COMMD6-208ENST00000471682 TYW1Q9NV66 732 aaKnown RBP16.69■□□□□ 0.26
COMMD6-208ENST00000471682 ANKFY1Q9P2R3 1169 aa16.69■□□□□ 0.26
COMMD6-208ENST00000471682 PTPRSQ13332 1948 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 ANKRD63C9JTQ0 380 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 OGTO15294 1046 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 TGFB1I1O43294 461 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 TLL1O43897 1013 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 UPP2O95045 317 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 CLTAP09496 248 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 ADSSP30520 456 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 STIM1Q13586 685 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 MYBPC2Q14324 1141 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 NFIL3Q16649 462 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 CCDC183Q5T5S1 534 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 FOXR2Q6PJQ5 311 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 GLB1LQ6UWU2 654 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 ABI1Q8IZP0 508 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 ERCC4Q92889 916 aaPredicted RBP16.68■□□□□ 0.26
COMMD6-208ENST00000471682 TSPAN18Q96SJ8 248 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 YME1L1Q96TA2 773 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 MSTO1Q9BUK6 570 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 MRPL9Q9BYD2 267 aaKnown RBP16.68■□□□□ 0.26
COMMD6-208ENST00000471682 NXF3Q9H4D5 531 aaKnown RBP16.68■□□□□ 0.26
COMMD6-208ENST00000471682 PLEKHA5Q9HAU0 1116 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 TOPORSQ9NS56 1045 aaPredicted RBP16.68■□□□□ 0.26
COMMD6-208ENST00000471682 RNF19AQ9NV58 838 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 KANSL3Q9P2N6 904 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 AGO2Q9UKV8 859 aaKnown RBP16.68■□□□□ 0.26
COMMD6-208ENST00000471682 TRAF3IP3Q9Y228 551 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 GDAQ9Y2T3 454 aa16.68■□□□□ 0.26
COMMD6-208ENST00000471682 CARNS1A5YM72 827 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 FAM189A1O60320 539 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 OFD1O75665 1012 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 MATR3P43243 847 aaKnown RBP eCLIP16.67■□□□□ 0.26
COMMD6-208ENST00000471682 YARSP54577 528 aaKnown RBP16.67■□□□□ 0.26
COMMD6-208ENST00000471682 XKR4Q5GH76 650 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 CLLU1OSQ5K130 101 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 ZBTB33Q86T24 672 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 SLC9A9Q8IVB4 645 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 ADSSL1Q8N142 457 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 RNF169Q8NCN4 708 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 POMGNT1Q8WZA1 660 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 DHTKD1Q96HY7 919 aaPredicted RBP16.67■□□□□ 0.26
COMMD6-208ENST00000471682 ACAP3Q96P50 834 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 HAPLN2Q9GZV7 340 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 KIAA1586Q9HCI6 787 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 AGPAT3Q9NRZ7 376 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 SNTG2Q9NY99 539 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 MSRAQ9UJ68 235 aa16.67■□□□□ 0.26
COMMD6-208ENST00000471682 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.67■□□□□ 0.26
COMMD6-208ENST00000471682 CALUO43852 315 aaPredicted RBP16.66■□□□□ 0.26
COMMD6-208ENST00000471682 RECQL4O94761 1208 aa16.66■□□□□ 0.26
COMMD6-208ENST00000471682 ADRB2P07550 413 aa16.66■□□□□ 0.26
COMMD6-208ENST00000471682 PRCPP42785 496 aa16.66■□□□□ 0.26
COMMD6-208ENST00000471682 EDRF1Q3B7T1 1238 aa16.66■□□□□ 0.26
COMMD6-208ENST00000471682 FAM109BQ6ICB4 259 aaPredicted RBP16.66■□□□□ 0.26
COMMD6-208ENST00000471682 CENPPQ6IPU0 288 aa16.66■□□□□ 0.26
COMMD6-208ENST00000471682 ARMCX5Q6P1M9 558 aa16.66■□□□□ 0.26
COMMD6-208ENST00000471682 CD302Q8IX05 232 aa16.66■□□□□ 0.26
COMMD6-208ENST00000471682 NELFCDQ8IXH7 590 aa16.66■□□□□ 0.26
COMMD6-208ENST00000471682 THNSL1Q8IYQ7 743 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms