RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 ZPR1O75312 459 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 IDH1O75874 414 aaKnown RBP11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 ETS2P15036 469 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 HOXA10P31260 410 aaPredicted RBP11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 POLGP54098 1239 aaPredicted RBP11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 DCTN2Q13561 401 aaKnown RBP11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 RASGRF1Q13972 1273 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 CGB2Q6NT52 195 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 FBXO33Q7Z6M2 555 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 IFNL3Q8IZI9 196 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 CTNNBL1Q8WYA6 563 aaPredicted RBP11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 TAF4BQ92750 862 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 PHKBQ93100 1093 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 ABTB1Q969K4 478 aaPredicted RBP11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 CGREF1Q99674 301 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 MYLK2Q9H1R3 596 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 PFDN4Q9NQP4 134 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 USH1CQ9Y6N9 552 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 PGRMC1O00264 195 aaKnown RBP11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 RPN1P04843 607 aaKnown RBP11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 UBTFL6P0CB48 400 aaPredicted RBP11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 KLK7P49862 253 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 PMS2P54278 862 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 RAB15P59190 212 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 RCN1Q15293 331 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 KHDC1Q4VXA5 237 aaKnown RBP11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 ZCWPW2Q504Y3 356 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 APOA5Q6Q788 366 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 NANOGNBQ7Z5D8 188 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 GPC2Q8N158 579 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 RIBC1Q8N443 379 aaPredicted RBP11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 FNDC8Q8TC99 324 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 GAB3Q8WWW8 586 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 DGCR14Q96DF8 476 aaKnown RBP11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 EDEM3Q9BZQ6 932 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 ARHGEF38Q9NXL2 777 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 STXBP5LQ9Y2K9 1186 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 FADS3Q9Y5Q0 445 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 MYPNQ86TC9 1320 aa11.5□□□□□ -0.57
CHMP2B-203ENST00000471660 FGRP09769 529 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 CALM1P0DP23 149 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 CALM2P0DP24 149 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 CALM3P0DP25 149 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 ZBTB48P10074 688 aaPredicted RBP11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 CDK4P11802 303 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 PTPN4P29074 926 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 EPHB2P29323 1055 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 USP11P51784 963 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 MAP3K10Q02779 954 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 GRM2Q14416 872 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 MIIPQ5JXC2 388 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 PHLDB3Q6NSJ2 640 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 TTI2Q6NXR4 508 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 B3GNT6Q6ZMB0 384 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 VSIG1Q86XK7 387 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 PASD1Q8IV76 773 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 KRT82Q9NSB4 513 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 ZDHHC18Q9NUE0 388 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 ZNF180Q9UJW8 692 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 UTP11Q9Y3A2 253 aaKnown RBP11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 NDUFB9Q9Y6M9 179 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 DCTN3O75935 186 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 FTCDO95954 541 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 SERPINB2P05120 415 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 T-ENOLP0DO92 83 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 SLC1A4P43007 532 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 SSRP1Q08945 709 aaKnown RBP11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 NFIXQ14938 502 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 USP50Q70EL3 339 aaPredicted RBP11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 HS2ST1Q7LGA3 356 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 DAAM2Q86T65 1068 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 NUP93Q8N1F7 819 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 SYNE4Q8N205 404 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 RASGEF1CQ8N431 466 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 USP40Q9NVE5 1235 aa11.49□□□□□ -0.57
CHMP2B-203ENST00000471660 TRIM49BA6NDI0 452 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 A6NJR5 290 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 TBC1D12O60347 775 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 SERPINB7O75635 380 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 PSMG1O95456 288 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 POU5F1Q01860 360 aaKnown RBP11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 INAQ16352 499 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 STYK1Q6J9G0 422 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 MFSD6Q6ZSS7 791 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 ZBED8Q8IZ13 594 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 BHMTQ93088 406 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 ITPKCQ96DU7 683 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 ROPN1BQ9BZX4 212 aaPredicted RBP11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 KIAA1683Q9H0B3 1180 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 SYNCQ9H7C4 482 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 ROPN1Q9HAT0 212 aaPredicted RBP11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 FAM217BQ9NTX9 383 aaPredicted RBP11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 HAO1Q9UJM8 370 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 COLQQ9Y215 455 aaPredicted RBP11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 SIK3Q9Y2K2 1263 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 TRIM75PA6NK02 468 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 CAPN9O14815 690 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 ZCCHC18P0CG32 403 aa11.48□□□□□ -0.57
CHMP2B-203ENST00000471660 IFNAR1P17181 557 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms