RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 PSMD2Q13200 908 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 HSP90AA2PQ14568 343 aaPredicted RBP15.02■□□□□ -0
LIMD1-203ENST00000465039 NOLC1Q14978 699 aaKnown RBP eCLIP15.02■□□□□ -0
LIMD1-203ENST00000465039 NOMO2Q5JPE7 1267 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 FAM26FQ5R3K3 315 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 L1TD1Q5T7N2 865 aaKnown RBP15.02■□□□□ -0
LIMD1-203ENST00000465039 SLFN12LQ6IEE8 588 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 AGMOQ6ZNB7 445 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 ENGASEQ8NFI3 743 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 CCDC47Q96A33 483 aaKnown RBP15.02■□□□□ -0
LIMD1-203ENST00000465039 GBP4Q96PP9 640 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 TSPAN18Q96SJ8 248 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 CDT1Q9H211 546 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 GOLPH3LQ9H4A5 285 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 POLD4Q9HCU8 107 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 TOPORSQ9NS56 1045 aaPredicted RBP15.02■□□□□ -0
LIMD1-203ENST00000465039 MTMR10Q9NXD2 777 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 SERTAD1Q9UHV2 236 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 STYXL1Q9Y6J8 313 aa15.02■□□□□ -0
LIMD1-203ENST00000465039 TTLL13PA6NNM8 815 aa15.01□□□□□ -0.01
LIMD1-203ENST00000465039 TBKBP1A7MCY6 615 aa15.01□□□□□ -0.01
LIMD1-203ENST00000465039 KIAA0391O15091 583 aaKnown RBP15.01□□□□□ -0.01
LIMD1-203ENST00000465039 OFD1O75665 1012 aa15.01□□□□□ -0.01
LIMD1-203ENST00000465039 NPTXRO95502 500 aa15.01□□□□□ -0.01
LIMD1-203ENST00000465039 EDN1P05305 212 aa15.01□□□□□ -0.01
LIMD1-203ENST00000465039 BMPR1AP36894 532 aa15.01□□□□□ -0.01
LIMD1-203ENST00000465039 LIG4P49917 911 aa15.01□□□□□ -0.01
LIMD1-203ENST00000465039 UBE3AQ05086 875 aa15.01□□□□□ -0.01
LIMD1-203ENST00000465039 POSTNQ15063 836 aa15.01□□□□□ -0.01
LIMD1-203ENST00000465039 TMEM192Q8IY95 271 aa15.01□□□□□ -0.01
LIMD1-203ENST00000465039 RNF169Q8NCN4 708 aa15.01□□□□□ -0.01
LIMD1-203ENST00000465039 ACCSQ96QU6 501 aa15.01□□□□□ -0.01
LIMD1-203ENST00000465039 CCDC94Q9BW85 323 aaPredicted RBP15.01□□□□□ -0.01
LIMD1-203ENST00000465039 TARS2Q9BW92 718 aaKnown RBP15.01□□□□□ -0.01
LIMD1-203ENST00000465039 LMAN2LQ9H0V9 348 aa15.01□□□□□ -0.01
LIMD1-203ENST00000465039 NXF3Q9H4D5 531 aaKnown RBP15.01□□□□□ -0.01
LIMD1-203ENST00000465039 MRPL42Q9Y6G3 142 aaKnown RBP15.01□□□□□ -0.01
LIMD1-203ENST00000465039 MYO9BQ13459 2157 aa15.01□□□□□ -0.01
LIMD1-203ENST00000465039 CDH23Q9H251 3354 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 ARL5CA6NH57 179 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 LIG1P18858 919 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 NMT1P30419 496 aaKnown RBP15□□□□□ -0.01
LIMD1-203ENST00000465039 GRIK3Q13003 919 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 SNW1Q13573 536 aaKnown RBP15□□□□□ -0.01
LIMD1-203ENST00000465039 KCNB1Q14721 858 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 BMT2Q1RMZ1 405 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 EPC2Q52LR7 807 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 EEF1DP3Q658K8 133 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 EPM2AIP1Q7L775 607 aaPredicted RBP15□□□□□ -0.01
LIMD1-203ENST00000465039 FBXO22Q8NEZ5 403 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 HELQQ8TDG4 1101 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 BICD1Q96G01 975 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 TMEM175Q9BSA9 504 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 TCHPQ9BT92 498 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 TBC1D13Q9NVG8 400 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 CGNQ9P2M7 1197 aaKnown RBP15□□□□□ -0.01
LIMD1-203ENST00000465039 PCDHB12Q9Y5F1 795 aa15□□□□□ -0.01
LIMD1-203ENST00000465039 KIAA1671Q9BY89 1806 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 A0A0B4J269 797 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 H3BNC9 293 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 KINO60870 393 aaKnown RBP14.99□□□□□ -0.01
LIMD1-203ENST00000465039 ARHGEF15O94989 841 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 KIF20AO95235 890 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 GCNT3O95395 438 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 CLTAP09496 248 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 CTNNB1P35222 781 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 AFMP43652 599 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 YARSP54577 528 aaKnown RBP14.99□□□□□ -0.01
LIMD1-203ENST00000465039 DPYDQ12882 1025 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 CUL4BQ13620 913 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 XKR4Q5GH76 650 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 TMEM174Q8WUU8 243 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 STAMQ92783 540 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 ZNF558Q96NG5 402 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 GAS2L1Q99501 681 aaPredicted RBP14.99□□□□□ -0.01
LIMD1-203ENST00000465039 CWH43Q9H720 699 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 PLEKHA5Q9HAU0 1116 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 TYW1Q9NV66 732 aaKnown RBP14.99□□□□□ -0.01
LIMD1-203ENST00000465039 EXOC1Q9NV70 894 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 RMND1Q9NWS8 449 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 ANKFY1Q9P2R3 1169 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 LZTS1Q9Y250 596 aa14.99□□□□□ -0.01
LIMD1-203ENST00000465039 COL4A4P53420 1690 aaPredicted RBP14.98□□□□□ -0.01
LIMD1-203ENST00000465039 OGTO15294 1046 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 KLRC4O43908 158 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 RECQL4O94761 1208 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 RHOBTB3O94955 611 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 GARTP22102 1010 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 MLH1P40692 756 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 ALDH7A1P49419 539 aaKnown RBP14.98□□□□□ -0.01
LIMD1-203ENST00000465039 GATMP50440 423 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 PLCB3Q01970 1234 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 RNASELQ05823 741 aaKnown RBP14.98□□□□□ -0.01
LIMD1-203ENST00000465039 DSC1Q08554 894 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 GRIN2CQ14957 1233 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 PTPROQ16827 1216 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 PAN2Q504Q3 1202 aaKnown RBP14.98□□□□□ -0.01
LIMD1-203ENST00000465039 ZC2HC1CQ53FD0 456 aaPredicted RBP14.98□□□□□ -0.01
LIMD1-203ENST00000465039 CD302Q8IX05 232 aa14.98□□□□□ -0.01
LIMD1-203ENST00000465039 SPATA20Q8TB22 786 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms