RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 ATP8B1O43520 1251 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 ADCY3O60266 1144 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 TACC1O75410 805 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 SASH3O75995 380 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 C22orf31O95567 290 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 RHOXF2BP0C7M4 288 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 PRKAR2AP13861 404 aaKnown RBP15.78■□□□□ 0.12
COL5A1-205ENST00000464187 FSCN1Q16658 493 aaKnown RBP15.78■□□□□ 0.12
COL5A1-205ENST00000464187 EFCAB12Q6NXP0 572 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 MAP4K3Q8IVH8 894 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 METTL13Q8N6R0 699 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 GOLGA5Q8TBA6 731 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 RAET1EQ8TD07 263 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 TCP11Q8WWU5 503 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 PRPF31Q8WWY3 499 aaKnown RBP15.78■□□□□ 0.12
COL5A1-205ENST00000464187 KAT2BQ92831 832 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 SLC35C1Q96A29 364 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 BORCS6Q96GS4 357 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 MMS19Q96T76 1030 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 RHOXF2Q9BQY4 288 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 ARFGAP3Q9NP61 516 aa15.78■□□□□ 0.12
COL5A1-205ENST00000464187 H0YCG3 227 aa15.77■□□□□ 0.11
COL5A1-205ENST00000464187 KLRC1P26715 233 aa15.77■□□□□ 0.11
COL5A1-205ENST00000464187 PON1P27169 355 aa15.77■□□□□ 0.11
COL5A1-205ENST00000464187 PLA2G4AP47712 749 aa15.77■□□□□ 0.11
COL5A1-205ENST00000464187 PPFIA1Q13136 1202 aa15.77■□□□□ 0.11
COL5A1-205ENST00000464187 CAPSQ13938 189 aa15.77■□□□□ 0.11
COL5A1-205ENST00000464187 ASIC2Q16515 512 aa15.77■□□□□ 0.11
COL5A1-205ENST00000464187 EXOC3L4Q17RC7 722 aa15.77■□□□□ 0.11
COL5A1-205ENST00000464187 KIAA0753Q2KHM9 967 aa15.77■□□□□ 0.11
COL5A1-205ENST00000464187 PSPC1Q8WXF1 523 aaKnown RBP15.77■□□□□ 0.11
COL5A1-205ENST00000464187 HVCN1Q96D96 273 aa15.77■□□□□ 0.11
COL5A1-205ENST00000464187 CAPZA3Q96KX2 299 aa15.77■□□□□ 0.11
COL5A1-205ENST00000464187 SALL4Q9UJQ4 1053 aa15.77■□□□□ 0.11
COL5A1-205ENST00000464187 COL1A2P08123 1366 aa15.77■□□□□ 0.11
COL5A1-205ENST00000464187 TISP43B9A030 160 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 MAGEB2O15479 319 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 HMGCRP04035 888 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 MYL3P08590 195 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 C6orf222P0C671 652 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-205ENST00000464187 ABCD1P33897 745 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 CLCN3P51790 818 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 CKAP4Q07065 602 aaKnown RBP15.76■□□□□ 0.11
COL5A1-205ENST00000464187 MXD4Q14582 209 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-205ENST00000464187 GRIK4Q16099 956 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 KLHDC7AQ5VTJ3 777 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 TCERG1LQ5VWI1 586 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 TAS1R3Q7RTX0 852 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 DEPTORQ8TB45 409 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 SIX2Q9NPC8 291 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 SUCLA2Q9P2R7 463 aaPredicted RBP15.76■□□□□ 0.11
COL5A1-205ENST00000464187 TSKSQ9UJT2 592 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 EXOC7Q9UPT5 735 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 JRKLQ9Y4A0 524 aa15.76■□□□□ 0.11
COL5A1-205ENST00000464187 MYADML2A6NDP7 307 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 ZNF185O15231 689 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 RARBP10826 455 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 UCHL3P15374 230 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 CCND3P30281 292 aaPredicted RBP15.75■□□□□ 0.11
COL5A1-205ENST00000464187 GJA9P57773 515 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 MAP2K1Q02750 393 aaPredicted RBP15.75■□□□□ 0.11
COL5A1-205ENST00000464187 ARID5AQ03989 594 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 LAMTOR4Q0VGL1 99 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 ARHGEF6Q15052 776 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 LONRF2Q1L5Z9 754 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 RHPN2Q8IUC4 686 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 FAM186BQ8IYM0 893 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 TXLNBQ8N3L3 684 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 PXYLP1Q8TE99 480 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 KCNN1Q92952 543 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 BEGAINQ9BUH8 593 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 SNX12Q9UMY4 172 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 CASP8AP2Q9UKL3 1982 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 PDE2AO00408 941 aaPredicted RBP15.75■□□□□ 0.11
COL5A1-205ENST00000464187 PGK1P00558 417 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 GJB1P08034 283 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 PSMC2P35998 433 aaKnown RBP15.75■□□□□ 0.11
COL5A1-205ENST00000464187 SNRPFP62306 86 aaKnown RBP15.75■□□□□ 0.11
COL5A1-205ENST00000464187 KLHL30Q0D2K2 578 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 MFSD10Q14728 455 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 SLC18A3Q16572 532 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 MARCH8Q5T0T0 291 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 MTHFD1LQ6UB35 978 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 GBP6Q6ZN66 633 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 RNF149Q8NC42 400 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 HNRNPLLQ8WVV9 542 aaKnown RBP15.75■□□□□ 0.11
COL5A1-205ENST00000464187 ALS2CR12Q96Q35 445 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 CBWD1Q9BRT8 395 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 MKNK1Q9BUB5 465 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 SPC25Q9HBM1 224 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 ST7Q9NRC1 585 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 SETD4Q9NVD3 440 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 DMAC2Q9NW81 257 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 GCNT4Q9P109 453 aa15.75■□□□□ 0.11
COL5A1-205ENST00000464187 AJAP1Q9UKB5 411 aaPredicted RBP15.75■□□□□ 0.11
COL5A1-205ENST00000464187 A0A087X0T9 212 aa15.74■□□□□ 0.11
COL5A1-205ENST00000464187 GTPBP10A4D1E9 387 aaKnown RBP15.74■□□□□ 0.11
COL5A1-205ENST00000464187 K7ERI5 159 aa15.74■□□□□ 0.11
COL5A1-205ENST00000464187 FAM228BP0C875 321 aa15.74■□□□□ 0.11
COL5A1-205ENST00000464187 SRGAP2CP0DJJ0 459 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms