RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 ERVFRD-1P60508 538 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 NKX3-2P78367 333 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 IRX6P78412 446 aaPredicted RBP4.61□□□□□ -1.67
GPNMB-205ENST00000463011 CDC42EP1Q00587 391 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 ICA1Q05084 483 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 CD69Q07108 199 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 TARDBPQ13148 414 aaKnown RBP eCLIP4.61□□□□□ -1.67
GPNMB-205ENST00000463011 PUM3Q15397 648 aaKnown RBP4.61□□□□□ -1.67
GPNMB-205ENST00000463011 MAPRE1Q15691 268 aaKnown RBP4.61□□□□□ -1.67
GPNMB-205ENST00000463011 CNGA2Q16280 664 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 DGKDQ16760 1214 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 KLHDC7AQ5VTJ3 777 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 TLDC1Q6P9B6 456 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 SLC23A3Q6PIS1 610 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 LVRNQ6Q4G3 990 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 ABHD15Q6UXT9 468 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 SESTD1Q86VW0 696 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 AMIGO3Q86WK7 504 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 SYTL1Q8IYJ3 562 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 NME8Q8N427 588 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 CELF5Q8N6W0 485 aaKnown RBP4.61□□□□□ -1.67
GPNMB-205ENST00000463011 OR5AN1Q8NGI8 311 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 CCHCR1Q8TD31 782 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 BRI3BPQ8WY22 251 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 ALG3Q92685 438 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 DYDC2Q96IM9 177 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 PAWRQ96IZ0 340 aaKnown RBP4.61□□□□□ -1.67
GPNMB-205ENST00000463011 SAMD11Q96NU1 681 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 TACO1Q9BSH4 297 aaKnown RBP4.61□□□□□ -1.67
GPNMB-205ENST00000463011 TMX4Q9H1E5 349 aaPredicted RBP4.61□□□□□ -1.67
GPNMB-205ENST00000463011 MYLK2Q9H1R3 596 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 PNPLA8Q9NP80 782 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 ARHGAP20Q9P2F6 1191 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 CPNE7Q9UBL6 633 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 PADI4Q9UM07 663 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 PCDHA6Q9UN73 950 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 MAGED2Q9UNF1 606 aaPredicted RBP4.61□□□□□ -1.67
GPNMB-205ENST00000463011 SIK3Q9Y2K2 1263 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 PCDHA1Q9Y5I3 950 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 RPTORQ8N122 1335 aa4.61□□□□□ -1.67
GPNMB-205ENST00000463011 MYO1FO00160 1098 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 FOXN3O00409 490 aaPredicted RBP4.6□□□□□ -1.67
GPNMB-205ENST00000463011 APOL1O14791 398 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 N4BP3O15049 544 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 ADAMTS3O15072 1205 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 PRAMEF4O60810 478 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 IL18RAPO95256 599 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 MED26O95402 600 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 PAPLNO95428 1278 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 LY86O95711 162 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 AGR2O95994 175 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 IL18BPO95998 194 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 PARP1P09874 1014 aaKnown RBP4.6□□□□□ -1.67
GPNMB-205ENST00000463011 HARSP12081 509 aaKnown RBP4.6□□□□□ -1.67
GPNMB-205ENST00000463011 NPR1P16066 1061 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 BDNFP23560 247 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 SMARCA1P28370 1054 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 MAPK9P45984 424 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 MAPKAPK2P49137 400 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 PER3P56645 1201 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 SNAPC2Q13487 334 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 PMS2P11Q13670 270 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 DAG1Q14118 895 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 STARD3Q14849 445 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 RSPO4Q2I0M5 234 aaPredicted RBP4.6□□□□□ -1.67
GPNMB-205ENST00000463011 PRR16Q569H4 304 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 NKAPLQ5M9Q1 402 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 ADGRF1Q5T601 910 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 KANK2Q63ZY3 851 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 PGBD2Q6P3X8 592 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 GADL1Q6ZQY3 521 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 Q6ZVL8 140 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 Q8N3U1 123 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 RNF152Q8N8N0 203 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 ZNF527Q8NB42 609 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 FLCNQ8NFG4 579 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 HOXB13Q92826 284 aaPredicted RBP4.6□□□□□ -1.67
GPNMB-205ENST00000463011 TBC1D20Q96BZ9 403 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 TMEM41AQ96HV5 264 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 TMX3Q96JJ7 454 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 FAM167AQ96KS9 214 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 MRGPRX4Q96LA9 322 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 SYT3Q9BQG1 590 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 UNKQ9C0B0 810 aaKnown RBP4.6□□□□□ -1.67
GPNMB-205ENST00000463011 RNF32Q9H0A6 362 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 ZHX3Q9H4I2 956 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 MANSC1Q9H8J5 431 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 AGO4Q9HCK5 861 aaKnown RBP4.6□□□□□ -1.67
GPNMB-205ENST00000463011 EPB41L4AQ9HCS5 686 aaPredicted RBP4.6□□□□□ -1.67
GPNMB-205ENST00000463011 SARS2Q9NP81 518 aaKnown RBP4.6□□□□□ -1.67
GPNMB-205ENST00000463011 GJB4Q9NTQ9 266 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 ZNF69Q9UC07 566 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 PLA2G2DQ9UNK4 145 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 GPR52Q9Y2T5 361 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 CEP83Q9Y592 693 aa4.6□□□□□ -1.67
GPNMB-205ENST00000463011 A0A1W2PR48 441 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 ISM1B1AKI9 464 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 ENDOD1O94919 500 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 ARIH2O95376 493 aa4.59□□□□□ -1.67
GPNMB-205ENST00000463011 CSTBP04080 98 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms