RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 CAMKK2Q96RR4 588 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 NUP88Q99567 741 aaPredicted RBP6.15□□□□□ -1.42
VBP1-202ENST00000460509 TCF25Q9BQ70 676 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 PLA2G12BQ9BX93 195 aa6.15□□□□□ -1.42
VBP1-202ENST00000460509 SENP6Q9GZR1 1112 aaPredicted RBP6.15□□□□□ -1.42
VBP1-202ENST00000460509 MTSS1O43312 755 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 DTNBO60941 627 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 OFD1O75665 1012 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 HSPA6P17066 643 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 EDNRBP24530 442 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 AKAP5P24588 427 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 EPHB4P54760 987 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 ADAM8P78325 824 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 APBA1Q02410 837 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 ZNF267Q14586 743 aaPredicted RBP6.14□□□□□ -1.43
VBP1-202ENST00000460509 ADGRE4PQ86SQ3 457 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 RSPH3Q86UC2 560 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 GPR135Q8IZ08 494 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 OR7D4Q8NG98 312 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.14□□□□□ -1.43
VBP1-202ENST00000460509 GTPBP4Q9BZE4 634 aaKnown RBP6.14□□□□□ -1.43
VBP1-202ENST00000460509 MANSC1Q9H8J5 431 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 AGO3Q9H9G7 860 aaKnown RBP6.14□□□□□ -1.43
VBP1-202ENST00000460509 PPP4R1LQ9P1A2 415 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 IPPQ9Y573 584 aa6.14□□□□□ -1.43
VBP1-202ENST00000460509 GOLGA6CA6NDK9 693 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 GOLGA6BA6NDN3 693 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 PLATP00750 562 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 GASTP01350 101 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 POU2F2P09086 479 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 GOLGA6DP0CG33 693 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 SYN1P17600 705 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 GRM7Q14831 915 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 PRAMEF14Q5SWL7 426 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 GJC2Q5T442 439 aaPredicted RBP6.13□□□□□ -1.43
VBP1-202ENST00000460509 PPP4R3AQ6IN85 833 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 USP45Q70EL2 814 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 PDZD4Q76G19 769 aaPredicted RBP6.13□□□□□ -1.43
VBP1-202ENST00000460509 TCEAL8Q8IYN2 117 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 IL17RAQ96F46 866 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 MAP3K14Q99558 947 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 PDCD2LQ9BRP1 358 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 MEGF9Q9H1U4 602 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 BCO1Q9HAY6 547 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 NMRK2Q9NPI5 230 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 LANCL2Q9NS86 450 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 TDP1Q9NUW8 608 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 GOLGA6AQ9NYA3 693 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 TRPS1Q9UHF7 1281 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 ZMYM3Q14202 1370 aa6.13□□□□□ -1.43
VBP1-202ENST00000460509 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 STC2O76061 302 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 RPLP2P05387 115 aaKnown RBP6.12□□□□□ -1.43
VBP1-202ENST00000460509 U2AF1L5P0DN76 240 aaPredicted RBP6.12□□□□□ -1.43
VBP1-202ENST00000460509 MYBP10242 640 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 CRHR1P34998 444 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 SREBF1P36956 1147 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 RPS19P39019 145 aaKnown RBP6.12□□□□□ -1.43
VBP1-202ENST00000460509 WASP42768 502 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 GZMKP49863 264 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 FXR1P51114 621 aaKnown RBP eCLIP6.12□□□□□ -1.43
VBP1-202ENST00000460509 U2AF1Q01081 240 aaKnown RBP eCLIP6.12□□□□□ -1.43
VBP1-202ENST00000460509 GTF2H3Q13889 308 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 FAM214AQ32MH5 1076 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 MINDY4Q4G0A6 757 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 ARHGAP29Q52LW3 1261 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 CCDC157Q569K6 752 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 HSP90AB2PQ58FF8 381 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 CXorf57Q6NSI4 855 aaKnown RBP6.12□□□□□ -1.43
VBP1-202ENST00000460509 LILRA6Q6PI73 481 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 FAM111BQ6SJ93 734 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 CIR1Q86X95 450 aaPredicted RBP6.12□□□□□ -1.43
VBP1-202ENST00000460509 DRC7Q8IY82 874 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 CAMKK1Q8N5S9 505 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 LILRA3Q8N6C8 439 aaPredicted RBP6.12□□□□□ -1.43
VBP1-202ENST00000460509 MAGEB6Q8N7X4 407 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 HOXB13Q92826 284 aaPredicted RBP6.12□□□□□ -1.43
VBP1-202ENST00000460509 TMX3Q96JJ7 454 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 CCDC136Q96JN2 1154 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 TEPSINQ96N21 525 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 NELFAQ9H3P2 528 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 ANLNQ9NQW6 1124 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 TMEM140Q9NV12 185 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 AJAP1Q9UKB5 411 aaPredicted RBP6.12□□□□□ -1.43
VBP1-202ENST00000460509 SIK3Q9Y2K2 1263 aa6.12□□□□□ -1.43
VBP1-202ENST00000460509 MYBBP1AQ9BQG0 1328 aaKnown RBP6.11□□□□□ -1.43
VBP1-202ENST00000460509 RAP2AP10114 183 aa6.11□□□□□ -1.43
VBP1-202ENST00000460509 HOXA5P20719 270 aa6.11□□□□□ -1.43
VBP1-202ENST00000460509 LPOP22079 712 aaPredicted RBP6.11□□□□□ -1.43
VBP1-202ENST00000460509 SLC6A9P48067 706 aa6.11□□□□□ -1.43
VBP1-202ENST00000460509 PGS1Q32NB8 556 aa6.11□□□□□ -1.43
VBP1-202ENST00000460509 ZFYVE27Q5T4F4 411 aa6.11□□□□□ -1.43
VBP1-202ENST00000460509 NXNQ6DKJ4 435 aa6.11□□□□□ -1.43
VBP1-202ENST00000460509 EPM2AIP1Q7L775 607 aaPredicted RBP6.11□□□□□ -1.43
VBP1-202ENST00000460509 TRMT2AQ8IZ69 625 aaKnown RBP6.11□□□□□ -1.43
VBP1-202ENST00000460509 HPS3Q969F9 1004 aa6.11□□□□□ -1.43
VBP1-202ENST00000460509 MVB12AQ96EY5 273 aa6.11□□□□□ -1.43
VBP1-202ENST00000460509 CLPTM1LQ96KA5 538 aa6.11□□□□□ -1.43
VBP1-202ENST00000460509 AIFM3Q96NN9 605 aa6.11□□□□□ -1.43
VBP1-202ENST00000460509 ZFR2Q9UPR6 939 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms