RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 CCDC114Q96M63 670 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 RABEP2Q9H5N1 569 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 ATP6V0A4Q9HBG4 840 aa17.05■□□□□ 0.32
CMTM3-203ENST00000460097 KIAA1217Q5T5P2 1943 aa17.04■□□□□ 0.32
CMTM3-203ENST00000460097 MEIS1O00470 390 aa17.04■□□□□ 0.32
CMTM3-203ENST00000460097 EPHB6O15197 1021 aa17.04■□□□□ 0.32
CMTM3-203ENST00000460097 NCK2O43639 380 aa17.04■□□□□ 0.32
CMTM3-203ENST00000460097 ADAMTS4O75173 837 aa17.04■□□□□ 0.32
CMTM3-203ENST00000460097 OR52Z1P0C646 297 aa17.04■□□□□ 0.32
CMTM3-203ENST00000460097 GCFC2P16383 781 aaKnown RBP17.04■□□□□ 0.32
CMTM3-203ENST00000460097 SP2Q02086 613 aa17.04■□□□□ 0.32
CMTM3-203ENST00000460097 INF2Q27J81 1249 aa17.04■□□□□ 0.32
CMTM3-203ENST00000460097 OR6J1Q8NGC5 347 aa17.04■□□□□ 0.32
CMTM3-203ENST00000460097 LRRC15Q8TF66 581 aa17.04■□□□□ 0.32
CMTM3-203ENST00000460097 UPF3AQ9H1J1 476 aaKnown RBP17.04■□□□□ 0.32
CMTM3-203ENST00000460097 FAM86B1E9PN63 330 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 DNM1LO00429 736 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 GH1P01241 217 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 GSTA1P08263 222 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 FAM86B2P0C5J1 330 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 ECHS1P30084 290 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 CIITAP33076 1130 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 NKX3-2P78367 333 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 SLC18A3Q16572 532 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 IFI16Q16666 785 aaKnown RBP17.03■□□□□ 0.32
CMTM3-203ENST00000460097 GNASQ5JWF2 1037 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 LRRC55Q6ZSA7 311 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 NIPA1Q7RTP0 329 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 DHX37Q8IY37 1157 aaKnown RBP17.03■□□□□ 0.32
CMTM3-203ENST00000460097 KLHDC9Q8NEP7 349 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 IFT81Q8WYA0 676 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 SEC14L1Q92503 715 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 MIEF2Q96C03 454 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 SENP7Q9BQF6 1050 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 MMRN2Q9H8L6 949 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 CD248Q9HCU0 757 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 FAM207AQ9NSI2 230 aaPredicted RBP17.03■□□□□ 0.32
CMTM3-203ENST00000460097 ODF2LQ9ULJ1 636 aa17.03■□□□□ 0.32
CMTM3-203ENST00000460097 CCDC188H7C350 402 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 EDIL3O43854 480 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 MGRN1O60291 552 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 PALMO75781 387 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 CAPN15O75808 1086 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 GNA14O95837 355 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 EZRP15311 586 aaKnown RBP17.02■□□□□ 0.32
CMTM3-203ENST00000460097 UBA1P22314 1058 aaKnown RBP17.02■□□□□ 0.32
CMTM3-203ENST00000460097 HSD17B3P37058 310 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 SEC24CP53992 1094 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 MARSP56192 900 aaKnown RBP17.02■□□□□ 0.32
CMTM3-203ENST00000460097 PPP2R2AP63151 447 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 LAMC2Q13753 1193 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 CELF3Q5SZQ8 465 aaKnown RBP17.02■□□□□ 0.32
CMTM3-203ENST00000460097 CRELD2Q6UXH1 353 aaPredicted RBP17.02■□□□□ 0.32
CMTM3-203ENST00000460097 CACNA2D3Q8IZS8 1091 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 TATDN2Q93075 761 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 MS4A14Q96JA4 679 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 KRT12Q99456 494 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 OSBPL7Q9BZF2 842 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 KCNH7Q9NS40 1196 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 SMARCAL1Q9NZC9 954 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 EHD2Q9NZN4 543 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 AIPL1Q9NZN9 384 aa17.02■□□□□ 0.32
CMTM3-203ENST00000460097 MKI67P46013 3256 aaKnown RBP17.02■□□□□ 0.32
CMTM3-203ENST00000460097 PP2D1A8MPX8 630 aa17.02■□□□□ 0.31
CMTM3-203ENST00000460097 KBTBD13C9JR72 458 aa17.02■□□□□ 0.31
CMTM3-203ENST00000460097 RAD51CO43502 376 aa17.02■□□□□ 0.31
CMTM3-203ENST00000460097 GGPS1O95749 300 aa17.02■□□□□ 0.31
CMTM3-203ENST00000460097 ARP10275 920 aa17.02■□□□□ 0.31
CMTM3-203ENST00000460097 EIF3BP55884 814 aaKnown RBP17.02■□□□□ 0.31
CMTM3-203ENST00000460097 GFPT1Q06210 699 aaPredicted RBP17.02■□□□□ 0.31
CMTM3-203ENST00000460097 FSCN1Q16658 493 aaKnown RBP17.02■□□□□ 0.31
CMTM3-203ENST00000460097 PRR16Q569H4 304 aa17.02■□□□□ 0.31
CMTM3-203ENST00000460097 BRDTQ58F21 947 aaPredicted RBP17.02■□□□□ 0.31
CMTM3-203ENST00000460097 SFMBT2Q5VUG0 894 aa17.02■□□□□ 0.31
CMTM3-203ENST00000460097 CACNA2D4Q7Z3S7 1137 aa17.02■□□□□ 0.31
CMTM3-203ENST00000460097 MAATS1Q7Z4T9 603 aa17.02■□□□□ 0.31
CMTM3-203ENST00000460097 NEK8Q86SG6 692 aa17.02■□□□□ 0.31
CMTM3-203ENST00000460097 PCSK9Q8NBP7 692 aaKnown RBP17.02■□□□□ 0.31
CMTM3-203ENST00000460097 SEC16BQ96JE7 1060 aa17.02■□□□□ 0.31
CMTM3-203ENST00000460097 IGLV3-22A0A075B6J6 115 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 MYADML2A6NDP7 307 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 TULP1O00294 542 aaPredicted RBP17.01■□□□□ 0.31
CMTM3-203ENST00000460097 ATP9AO75110 1047 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 FARP2O94887 1054 aaPredicted RBP17.01■□□□□ 0.31
CMTM3-203ENST00000460097 CST5P28325 142 aaPredicted RBP17.01■□□□□ 0.31
CMTM3-203ENST00000460097 MNX1P50219 401 aaPredicted RBP17.01■□□□□ 0.31
CMTM3-203ENST00000460097 CPT1AP50416 773 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 SLC8A3P57103 927 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 BEX3Q00994 111 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 ARHGAP1Q07960 439 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 EHHADHQ08426 723 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 ZNF844Q08AG5 666 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 RIPK1Q13546 671 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 KCNA10Q16322 511 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 LETM2Q2VYF4 491 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 SV2BQ7L1I2 683 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 TAF4BQ92750 862 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 EMID1Q96A84 441 aaPredicted RBP17.01■□□□□ 0.31
CMTM3-203ENST00000460097 CALML4Q96GE6 196 aa17.01■□□□□ 0.31
CMTM3-203ENST00000460097 CEP63Q96MT8 703 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms