RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 CDC25AP30304 524 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 ATP2C1P98194 919 aaPredicted RBP13.78□□□□□ -0.2
CPSF4-208ENST00000452047 PPP2R5AQ15172 486 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 MAPK6Q16659 721 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 TPRNQ4KMQ1 711 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 KCNK18Q7Z418 384 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 KIFAP3Q92845 792 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 KIFC3Q9BVG8 833 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 HERC2P3Q9BVR0 1158 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 ADAM7Q9H2U9 754 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 POLD4Q9HCU8 107 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 DZANK1Q9NVP4 752 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 USP20Q9Y2K6 914 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 C2orf16Q68DN1 1984 aa13.78□□□□□ -0.2
CPSF4-208ENST00000452047 E9PMD0 336 aa13.77□□□□□ -0.21
CPSF4-208ENST00000452047 ACKR2O00590 384 aa13.77□□□□□ -0.21
CPSF4-208ENST00000452047 SSBP05455 408 aaKnown RBP eCLIP13.77□□□□□ -0.21
CPSF4-208ENST00000452047 CNPP09543 421 aaKnown RBP13.77□□□□□ -0.21
CPSF4-208ENST00000452047 OR1G1P47890 313 aa13.77□□□□□ -0.21
CPSF4-208ENST00000452047 ITIH3Q06033 890 aa13.77□□□□□ -0.21
CPSF4-208ENST00000452047 GRIK3Q13003 919 aa13.77□□□□□ -0.21
CPSF4-208ENST00000452047 PRPF4BQ13523 1007 aaKnown RBP13.77□□□□□ -0.21
CPSF4-208ENST00000452047 KRT79Q5XKE5 535 aa13.77□□□□□ -0.21
CPSF4-208ENST00000452047 DTHD1Q6ZMT9 781 aa13.77□□□□□ -0.21
CPSF4-208ENST00000452047 DAW1Q8N136 415 aa13.77□□□□□ -0.21
CPSF4-208ENST00000452047 DEPTORQ8TB45 409 aa13.77□□□□□ -0.21
CPSF4-208ENST00000452047 RPGRIP1Q96KN7 1286 aa13.77□□□□□ -0.21
CPSF4-208ENST00000452047 KLK14Q9P0G3 267 aa13.77□□□□□ -0.21
CPSF4-208ENST00000452047 DNM3Q9UQ16 869 aa13.77□□□□□ -0.21
CPSF4-208ENST00000452047 MYH11P35749 1972 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 H3BQV1 296 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 PTGESO14684 152 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 RECQL4O94761 1208 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 CLCN4P51793 760 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 EFNA5P52803 228 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 MAPK7Q13164 816 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 HYIQ5T013 277 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 EEF1DP3Q658K8 133 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 CES5AQ6NT32 575 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 TAS1R1Q7RTX1 841 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 PPFIBP1Q86W92 1011 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 FEZF2Q8TBJ5 459 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 IFT74Q96LB3 600 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 NECTIN4Q96NY8 510 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 KLHL5Q96PQ7 755 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 RPS6KC1Q96S38 1066 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 RUSC1Q9BVN2 902 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 EMILIN2Q9BXX0 1053 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 POMKQ9H5K3 350 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 MRPL17Q9NRX2 175 aaKnown RBP13.76□□□□□ -0.21
CPSF4-208ENST00000452047 PARP2Q9UGN5 583 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 SMC3Q9UQE7 1217 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.76□□□□□ -0.21
CPSF4-208ENST00000452047 ZNF318Q5VUA4 2279 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 TRIP11Q15643 1979 aa13.76□□□□□ -0.21
CPSF4-208ENST00000452047 MUC6Q6W4X9 2439 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 HIP1RO75146 1068 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 URODP06132 367 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 LIG1P18858 919 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 NPTX2P47972 431 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 GLUD2P49448 558 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 DSG1Q02413 1049 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 NAB2Q15742 525 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 RARS2Q5T160 578 aaKnown RBP13.75□□□□□ -0.21
CPSF4-208ENST00000452047 NT5DC1Q5TFE4 455 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 KIAA0319Q5VV43 1072 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 ARL6IP4Q66PJ3 421 aaKnown RBP13.75□□□□□ -0.21
CPSF4-208ENST00000452047 KIAA1841Q6NSI8 718 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 RINT1Q6NUQ1 792 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 KANK3Q6NY19 840 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 C1orf186Q6ZWK4 172 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 C12orf76Q8N812 135 aaPredicted RBP13.75□□□□□ -0.21
CPSF4-208ENST00000452047 TMEM87AQ8NBN3 555 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 EDAQ92838 391 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 FBXL18Q96ME1 805 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 PNMA5Q96PV4 448 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 ADPGKQ9BRR6 497 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 GPR62Q9BZJ7 368 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 CXCL16Q9H2A7 254 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 CHST7Q9NS84 486 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 SNTG2Q9NY99 539 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 CACNG4Q9UBN1 327 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 HCN4Q9Y3Q4 1203 aa13.75□□□□□ -0.21
CPSF4-208ENST00000452047 ARIH1Q9Y4X5 557 aaPredicted RBP13.75□□□□□ -0.21
CPSF4-208ENST00000452047 PHLPP2Q6ZVD8 1323 aa13.74□□□□□ -0.21
CPSF4-208ENST00000452047 VWA3AA6NCI4 1184 aa13.74□□□□□ -0.21
CPSF4-208ENST00000452047 C2CD2LO14523 706 aa13.74□□□□□ -0.21
CPSF4-208ENST00000452047 TEX28O15482 410 aa13.74□□□□□ -0.21
CPSF4-208ENST00000452047 NR1I2O75469 434 aa13.74□□□□□ -0.21
CPSF4-208ENST00000452047 WEE2P0C1S8 567 aa13.74□□□□□ -0.21
CPSF4-208ENST00000452047 KLRC2P26717 231 aa13.74□□□□□ -0.21
CPSF4-208ENST00000452047 MTHFRP42898 656 aa13.74□□□□□ -0.21
CPSF4-208ENST00000452047 PEX3P56589 373 aa13.74□□□□□ -0.21
CPSF4-208ENST00000452047 TUSC3Q13454 348 aa13.74□□□□□ -0.21
CPSF4-208ENST00000452047 CUL4AQ13619 759 aa13.74□□□□□ -0.21
CPSF4-208ENST00000452047 TMEM132AQ24JP5 1023 aa13.74□□□□□ -0.21
CPSF4-208ENST00000452047 DCAF4L1Q3SXM0 396 aa13.74□□□□□ -0.21
CPSF4-208ENST00000452047 ATF7IP2Q5U623 682 aa13.74□□□□□ -0.21
CPSF4-208ENST00000452047 LARP1BQ659C4 914 aaKnown RBP13.74□□□□□ -0.21
CPSF4-208ENST00000452047 FUT10Q6P4F1 479 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms