RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 PFKPQ01813 784 aa15.31■□□□□ 0.04
CPSF7-207ENST00000449811 CREMQ03060 361 aa15.31■□□□□ 0.04
CPSF7-207ENST00000449811 ZBTB41Q5SVQ8 909 aa15.31■□□□□ 0.04
CPSF7-207ENST00000449811 FUT10Q6P4F1 479 aa15.31■□□□□ 0.04
CPSF7-207ENST00000449811 B3GNT9Q6UX72 402 aa15.31■□□□□ 0.04
CPSF7-207ENST00000449811 RSPO2Q6UXX9 243 aaPredicted RBP15.31■□□□□ 0.04
CPSF7-207ENST00000449811 NELL1Q92832 810 aa15.31■□□□□ 0.04
CPSF7-207ENST00000449811 ZFP42Q96MM3 310 aa15.31■□□□□ 0.04
CPSF7-207ENST00000449811 MBOAT7Q96N66 472 aa15.31■□□□□ 0.04
CPSF7-207ENST00000449811 GPR62Q9BZJ7 368 aa15.31■□□□□ 0.04
CPSF7-207ENST00000449811 RNF39Q9H2S5 420 aa15.31■□□□□ 0.04
CPSF7-207ENST00000449811 GMEB2Q9UKD1 530 aa15.31■□□□□ 0.04
CPSF7-207ENST00000449811 PATJQ8NI35 1801 aa15.31■□□□□ 0.04
CPSF7-207ENST00000449811 PRPF3O43395 683 aaKnown RBP15.3■□□□□ 0.04
CPSF7-207ENST00000449811 TBC1D4O60343 1298 aa15.3■□□□□ 0.04
CPSF7-207ENST00000449811 ERLIN2O94905 339 aa15.3■□□□□ 0.04
CPSF7-207ENST00000449811 TGM1P22735 817 aa15.3■□□□□ 0.04
CPSF7-207ENST00000449811 PSMC5P62195 406 aa15.3■□□□□ 0.04
CPSF7-207ENST00000449811 NTHL1P78549 312 aa15.3■□□□□ 0.04
CPSF7-207ENST00000449811 TSSK4Q6SA08 328 aa15.3■□□□□ 0.04
CPSF7-207ENST00000449811 CCDC148Q8NFR7 591 aa15.3■□□□□ 0.04
CPSF7-207ENST00000449811 PRPF31Q8WWY3 499 aaKnown RBP15.3■□□□□ 0.04
CPSF7-207ENST00000449811 PSPC1Q8WXF1 523 aaKnown RBP15.3■□□□□ 0.04
CPSF7-207ENST00000449811 FGF13Q92913 245 aa15.3■□□□□ 0.04
CPSF7-207ENST00000449811 TMEM143Q96AN5 459 aa15.3■□□□□ 0.04
CPSF7-207ENST00000449811 EIF2AQ9BY44 585 aaKnown RBP15.3■□□□□ 0.04
CPSF7-207ENST00000449811 MIOSQ9NXC5 875 aa15.3■□□□□ 0.04
CPSF7-207ENST00000449811 MYH15Q9Y2K3 1946 aa15.3■□□□□ 0.04
CPSF7-207ENST00000449811 HES2Q9Y543 173 aa15.3■□□□□ 0.04
CPSF7-207ENST00000449811 MTCL1Q9Y4B5 1905 aaKnown RBP15.29■□□□□ 0.04
CPSF7-207ENST00000449811 NPEPPSP55786 919 aa15.29■□□□□ 0.04
CPSF7-207ENST00000449811 AKAP17AQ02040 695 aaKnown RBP15.29■□□□□ 0.04
CPSF7-207ENST00000449811 LAMTOR4Q0VGL1 99 aa15.29■□□□□ 0.04
CPSF7-207ENST00000449811 Q4G0T1 1027 aa15.29■□□□□ 0.04
CPSF7-207ENST00000449811 LIN9Q5TKA1 542 aa15.29■□□□□ 0.04
CPSF7-207ENST00000449811 RNF149Q8NC42 400 aa15.29■□□□□ 0.04
CPSF7-207ENST00000449811 TBCKQ8TEA7 893 aa15.29■□□□□ 0.04
CPSF7-207ENST00000449811 KXD1Q9BQD3 176 aa15.29■□□□□ 0.04
CPSF7-207ENST00000449811 APOL6Q9BWW8 343 aa15.29■□□□□ 0.04
CPSF7-207ENST00000449811 FBXW11Q9UKB1 542 aa15.29■□□□□ 0.04
CPSF7-207ENST00000449811 ADAM28Q9UKQ2 775 aa15.29■□□□□ 0.04
CPSF7-207ENST00000449811 NCAM2O15394 837 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 TSPAN1O60635 241 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 HNRNPA1P09651 372 aaKnown RBP eCLIP15.28■□□□□ 0.04
CPSF7-207ENST00000449811 TARSP26639 723 aaKnown RBP15.28■□□□□ 0.04
CPSF7-207ENST00000449811 FGD1P98174 961 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 ADCK5Q3MIX3 580 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 PPM1LQ5SGD2 360 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 NOTUMQ6P988 496 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 PRSS55Q6UWB4 352 aaPredicted RBP15.28■□□□□ 0.04
CPSF7-207ENST00000449811 TPRG1Q6ZUI0 275 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 EXOC8Q8IYI6 725 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 ZNF579Q8NAF0 562 aaKnown RBP15.28■□□□□ 0.04
CPSF7-207ENST00000449811 CLDN23Q96B33 292 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 CCDC51Q96ER9 411 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 CHAMP1Q96JM3 812 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 CEP170P1Q96L14 293 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 NELL2Q99435 816 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 PHF20Q9BVI0 1012 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 DHX33Q9H6R0 707 aaKnown RBP15.28■□□□□ 0.04
CPSF7-207ENST00000449811 PARD6AQ9NPB6 346 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 PRMT8Q9NR22 394 aaPredicted RBP15.28■□□□□ 0.04
CPSF7-207ENST00000449811 BMP2KQ9NSY1 1161 aaPredicted RBP15.28■□□□□ 0.04
CPSF7-207ENST00000449811 VPS54Q9P1Q0 977 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 POLIQ9UNA4 740 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 GIT1Q9Y2X7 761 aa15.28■□□□□ 0.04
CPSF7-207ENST00000449811 TDP2O95551 362 aa15.27■□□□□ 0.04
CPSF7-207ENST00000449811 C8AP07357 584 aa15.27■□□□□ 0.04
CPSF7-207ENST00000449811 AXLP30530 894 aa15.27■□□□□ 0.04
CPSF7-207ENST00000449811 RFC5P40937 340 aa15.27■□□□□ 0.04
CPSF7-207ENST00000449811 RPS9P46781 194 aaKnown RBP15.27■□□□□ 0.04
CPSF7-207ENST00000449811 RTP2Q5QGT7 225 aa15.27■□□□□ 0.04
CPSF7-207ENST00000449811 HACE1Q8IYU2 909 aa15.27■□□□□ 0.04
CPSF7-207ENST00000449811 ETNPPLQ8TBG4 499 aa15.27■□□□□ 0.04
CPSF7-207ENST00000449811 RABGGTAQ92696 567 aa15.27■□□□□ 0.04
CPSF7-207ENST00000449811 FAM126AQ9BYI3 521 aaPredicted RBP15.27■□□□□ 0.04
CPSF7-207ENST00000449811 TRIM6Q9C030 488 aaPredicted RBP15.27■□□□□ 0.04
CPSF7-207ENST00000449811 CSRNP2Q9H175 543 aa15.27■□□□□ 0.04
CPSF7-207ENST00000449811 PPME1Q9Y570 386 aa15.27■□□□□ 0.04
CPSF7-207ENST00000449811 SF3B1O75533 1304 aaKnown RBP eCLIP15.26■□□□□ 0.037e-6■■■■■ 28.7
CPSF7-207ENST00000449811 CYP3A7-CYP3A51PA0A087WV96 503 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 CCL16O15467 120 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 ASAP2O43150 1006 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 DKC1O60832 514 aaKnown RBP eCLIP15.26■□□□□ 0.03
CPSF7-207ENST00000449811 XYLBO75191 536 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 TADA2AO75478 443 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 CYP3A7P24462 503 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 HOXA9P31269 272 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 QARSP47897 775 aaKnown RBP15.26■□□□□ 0.03
CPSF7-207ENST00000449811 NCBP1Q09161 790 aaKnown RBP15.26■□□□□ 0.03
CPSF7-207ENST00000449811 SPEM2Q0P670 501 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 PCBP1Q15365 356 aaKnown RBP eCLIP15.26■□□□□ 0.03
CPSF7-207ENST00000449811 PPM1JQ5JR12 505 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 ZNF852Q6ZMS4 543 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 FERMT3Q86UX7 667 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 RASEFQ8IZ41 740 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 GSTCDQ8NEC7 633 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 ITFG1Q8TB96 612 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 NETO1Q8TDF5 533 aa15.26■□□□□ 0.03
CPSF7-207ENST00000449811 TCP11Q8WWU5 503 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms