RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 EXOC7Q9UPT5 735 aa10.08□□□□□ -0.8
RFX3-207ENST00000449190 A0A0U1RQF3 1178 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 FRMD3A2A2Y4 597 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 C5orf67F2Z3F1 127 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 H3BNC9 293 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 ACKR2O00590 384 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 CSDE1O75534 798 aaKnown RBP10.07□□□□□ -0.8
RFX3-207ENST00000449190 EOMESO95936 686 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 FGFR4P22455 802 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 NMT1P30419 496 aaKnown RBP10.07□□□□□ -0.8
RFX3-207ENST00000449190 MATR3P43243 847 aaKnown RBP eCLIP10.07□□□□□ -0.88e-10■■■□□ 15.7
RFX3-207ENST00000449190 MBTD1Q05BQ5 628 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 GPM6BQ13491 265 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 KCNB1Q14721 858 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 CCDC85BQ15834 202 aaPredicted RBP10.07□□□□□ -0.8
RFX3-207ENST00000449190 FAM187BQ17R55 369 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 KMT5BQ4FZB7 885 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 ZNF720Q7Z2F6 126 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 SYCP3Q8IZU3 236 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 ZNF687Q8N1G0 1237 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 TMEM161BQ8NDZ6 487 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 GPT2Q8TD30 523 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 PPM1EQ8WY54 764 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 HVCN1Q96D96 273 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 GSDMAQ96QA5 445 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 ACCSQ96QU6 501 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 KIFC3Q9BVG8 833 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 TRAIPQ9BWF2 469 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 PLVAPQ9BX97 442 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 MRPL4Q9BYD3 311 aaKnown RBP10.07□□□□□ -0.8
RFX3-207ENST00000449190 FZD8Q9H461 694 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 ST6GALNAC4Q9H4F1 302 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 TMEM206Q9H813 350 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 ARHGAP28Q9P2N2 729 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 MTUS1Q9ULD2 1270 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 PIN4Q9Y237 131 aaKnown RBP10.07□□□□□ -0.8
RFX3-207ENST00000449190 TTC3P53804 2025 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 ADGRA3Q8IWK6 1321 aa10.07□□□□□ -0.8
RFX3-207ENST00000449190 MICAL3Q7RTP6 2002 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 N4BP3O15049 544 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 HOXA2O43364 376 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 KLRC4O43908 158 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 RHOBTB3O94955 611 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 LINC00271P0C7V0 271 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 SKIP12755 728 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 GTF2BQ00403 316 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 PDAP1Q13442 181 aaKnown RBP10.06□□□□□ -0.8
RFX3-207ENST00000449190 PTPROQ16827 1216 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 L1TD1Q5T7N2 865 aaKnown RBP10.06□□□□□ -0.8
RFX3-207ENST00000449190 TWF2Q6IBS0 349 aaKnown RBP10.06□□□□□ -0.8
RFX3-207ENST00000449190 NOTUMQ6P988 496 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 ECHDC2Q86YB7 292 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.06□□□□□ -0.8
RFX3-207ENST00000449190 HACE1Q8IYU2 909 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 CCDC51Q96ER9 411 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 ADPGKQ9BRR6 497 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 TCHPQ9BT92 498 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 TRIM6Q9C030 488 aaPredicted RBP10.06□□□□□ -0.8
RFX3-207ENST00000449190 MINDY3Q9H8M7 445 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 SLC39A2Q9NP94 309 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 TBX20Q9UMR3 447 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 PCDHA5Q9Y5H7 936 aa10.06□□□□□ -0.8
RFX3-207ENST00000449190 TBKBP1A7MCY6 615 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 EIF3DO15371 548 aaKnown RBP eCLIP10.05□□□□□ -0.8
RFX3-207ENST00000449190 TSPAN1O60635 241 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 ZNF623O75123 536 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 LETM1O95202 739 aaPredicted RBP10.05□□□□□ -0.8
RFX3-207ENST00000449190 MYBP10242 640 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 LIG4P49917 911 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 STIM1Q13586 685 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 ZC2HC1CQ53FD0 456 aaPredicted RBP10.05□□□□□ -0.8
RFX3-207ENST00000449190 CCDC183Q5T5S1 534 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 ATF7IP2Q5U623 682 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 ZPBP2Q6X784 338 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 GDPD5Q8WTR4 605 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 ATXN2LQ8WWM7 1075 aaKnown RBP10.05□□□□□ -0.8
RFX3-207ENST00000449190 RSPH1Q8WYR4 309 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 P2RX5Q93086 422 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 CPB2Q96IY4 423 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 C11orf84Q9BUA3 381 aaPredicted RBP10.05□□□□□ -0.8
RFX3-207ENST00000449190 TMEM117Q9H0C3 514 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 CCDC113Q9H0I3 377 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 LMAN2LQ9H0V9 348 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 AAASQ9NRG9 546 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 AGPAT5Q9NUQ2 364 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 KIAA1468Q9P260 1216 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 MRPL42Q9Y6G3 142 aaKnown RBP10.05□□□□□ -0.8
RFX3-207ENST00000449190 TCHHQ07283 1943 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 UBE4BO95155 1302 aa10.05□□□□□ -0.8
RFX3-207ENST00000449190 GBF1Q92538 1859 aa10.04□□□□□ -0.8
RFX3-207ENST00000449190 PTPRSQ13332 1948 aa10.04□□□□□ -0.8
RFX3-207ENST00000449190 WDR81Q562E7 1941 aa10.04□□□□□ -0.8
RFX3-207ENST00000449190 PRPF6O94906 941 aaKnown RBP10.04□□□□□ -0.8
RFX3-207ENST00000449190 ARF4P18085 180 aaPredicted RBP10.04□□□□□ -0.8
RFX3-207ENST00000449190 IBSPP21815 317 aaPredicted RBP10.04□□□□□ -0.8
RFX3-207ENST00000449190 CTNNB1P35222 781 aa10.04□□□□□ -0.8
RFX3-207ENST00000449190 PPP1R2P41236 205 aa10.04□□□□□ -0.8
RFX3-207ENST00000449190 RAB27AP51159 221 aa10.04□□□□□ -0.8
RFX3-207ENST00000449190 HSP90AA2PQ14568 343 aaPredicted RBP10.04□□□□□ -0.8
RFX3-207ENST00000449190 NFKBIBQ15653 356 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms