RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.01□□□□□ -1.13
R3HDM1-210ENST00000443537 SMYD4Q8IYR2 804 aaPredicted RBP8.01□□□□□ -1.13
R3HDM1-210ENST00000443537 ANKRD35Q8N283 1001 aa8.01□□□□□ -1.13
R3HDM1-210ENST00000443537 MSL3Q8N5Y2 521 aaKnown RBP8.01□□□□□ -1.13
R3HDM1-210ENST00000443537 FBLIM1Q8WUP2 373 aa8.01□□□□□ -1.13
R3HDM1-210ENST00000443537 FAM46AQ96IP4 442 aaKnown RBP8.01□□□□□ -1.13
R3HDM1-210ENST00000443537 MBOAT7Q96N66 472 aa8.01□□□□□ -1.13
R3HDM1-210ENST00000443537 CYP39A1Q9NYL5 469 aa8.01□□□□□ -1.13
R3HDM1-210ENST00000443537 USP25Q9UHP3 1055 aa8.01□□□□□ -1.13
R3HDM1-210ENST00000443537 DIS3Q9Y2L1 958 aaKnown RBP8.01□□□□□ -1.13
R3HDM1-210ENST00000443537 SRPRBQ9Y5M8 271 aaKnown RBP8.01□□□□□ -1.13
R3HDM1-210ENST00000443537 ADGRA2Q96PE1 1338 aa8.01□□□□□ -1.13
R3HDM1-210ENST00000443537 DOCK3Q8IZD9 2030 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8□□□□□ -1.13
R3HDM1-210ENST00000443537 NFIBO00712 420 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 CA12O43570 354 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 CMA1P23946 247 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 CCND2P30279 289 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 MCM7P33993 719 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 GATA4P43694 442 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 RING1Q06587 406 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 PDIA5Q14554 519 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 UBE2SQ16763 222 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 CEP55Q53EZ4 464 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 SGO2Q562F6 1265 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 KCNV1Q6PIU1 500 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 NSMFQ6X4W1 530 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 FAM43AQ8N2R8 423 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 TMEM151AQ8N4L1 468 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 KCT2Q8NC54 265 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 SYTL5Q8TDW5 730 aaPredicted RBP8□□□□□ -1.13
R3HDM1-210ENST00000443537 SOCS4Q8WXH5 440 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 MRPS27Q92552 414 aaKnown RBP8□□□□□ -1.13
R3HDM1-210ENST00000443537 CAPNS2Q96L46 248 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 DRC1Q96MC2 740 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 RMDN3Q96TC7 470 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 PAGR1Q9BTK6 254 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 SRRTQ9BXP5 876 aaKnown RBP8□□□□□ -1.13
R3HDM1-210ENST00000443537 MOV10L1Q9BXT6 1211 aaKnown RBP8□□□□□ -1.13
R3HDM1-210ENST00000443537 A1CFQ9NQ94 594 aaKnown RBP8□□□□□ -1.13
R3HDM1-210ENST00000443537 PXMP2Q9NR77 195 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 HOMER2Q9NSB8 354 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 LMBRD1Q9NUN5 540 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 DDX19AQ9NUU7 478 aaKnown RBP8□□□□□ -1.13
R3HDM1-210ENST00000443537 BTBD7Q9P203 1132 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 RBPJLQ9UBG7 517 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 REV1Q9UBZ9 1251 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 KLHL3Q9UH77 587 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 DDX25Q9UHL0 483 aaKnown RBP8□□□□□ -1.13
R3HDM1-210ENST00000443537 TCEAL9Q9UHQ7 104 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 HOOK1Q9UJC3 728 aaKnown RBP8□□□□□ -1.13
R3HDM1-210ENST00000443537 STRIP2Q9ULQ0 834 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 PCDHB6Q9Y5E3 794 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 CLIC4Q9Y696 253 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 MCM3APO60318 1980 aa8□□□□□ -1.13
R3HDM1-210ENST00000443537 FAM237AA0A1B0GTK4 181 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 ASB14A6NK59 587 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 CTAGE5O15320 804 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 CNMDO75829 334 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 LETM1O95202 739 aaPredicted RBP7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 IMPDH2P12268 514 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 MUTP22033 750 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 HOXA13P31271 388 aaPredicted RBP7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 GTF2F1P35269 517 aaKnown RBP eCLIP7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 SNAP25P60880 206 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 ARHGEF6Q15052 776 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 CALCRLQ16602 461 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 MUM1L1Q5H9M0 696 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 EARS2Q5JPH6 523 aaKnown RBP7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 ARHGEF16Q5VV41 709 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 HAUS3Q68CZ6 603 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 CDPF1Q6NVV7 123 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 FAM173BQ6P4H8 233 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 NLRX1Q86UT6 975 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 HID1Q8IV36 788 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 ELOA2Q8IYF1 753 aaPredicted RBP7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 ANKRD13CQ8N6S4 541 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 GIMAP8Q8ND71 665 aaPredicted RBP7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 ISL2Q96A47 359 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 ANAPC16Q96DE5 110 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 MYRFLQ96LU7 910 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 MMP19Q99542 508 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 RIT2Q99578 217 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 PTPN18Q99952 460 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 PDCD2LQ9BRP1 358 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 WDR11Q9BZH6 1224 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 GSX1Q9H4S2 264 aaPredicted RBP7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 MAGEF1Q9HAY2 307 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 KCNMB3Q9NPA1 279 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 SAGE1Q9NXZ1 904 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 RIPK3Q9Y572 518 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 DDX49Q9Y6V7 483 aaKnown RBP7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 KDM3AQ9Y4C1 1321 aa7.99□□□□□ -1.13
R3HDM1-210ENST00000443537 DNAJC25-GNG10A0A024R161 153 aa7.98□□□□□ -1.13
R3HDM1-210ENST00000443537 SLC15A5A6NIM6 579 aa7.98□□□□□ -1.13
R3HDM1-210ENST00000443537 IGF2BP3O00425 579 aaKnown RBP eCLIP7.98□□□□□ -1.13
R3HDM1-210ENST00000443537 MEIS1O00470 390 aa7.98□□□□□ -1.13
R3HDM1-210ENST00000443537 DHX15O43143 795 aaKnown RBP7.98□□□□□ -1.13
R3HDM1-210ENST00000443537 MARCH6O60337 910 aa7.98□□□□□ -1.13
R3HDM1-210ENST00000443537 DTNBO60941 627 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms