RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ZEB2O60315 1214 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 DLATP10515 647 aaKnown RBP15.28■□□□□ 0.04
LIMD1-202ENST00000440097 SOX5P35711 763 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 JAM2P57087 298 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 PPIL2Q13356 520 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 CCDC181Q5TID7 509 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 ALS2CLQ60I27 953 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 NFRKBQ6P4R8 1299 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 FASTKD5Q7L8L6 764 aaKnown RBP15.28■□□□□ 0.04
LIMD1-202ENST00000440097 NAGPAQ9UK23 515 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 USP20Q9Y2K6 914 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 OTOFQ9HC10 1997 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 ADGRA3Q8IWK6 1321 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 SYNGAP1Q96PV0 1343 aa15.28■□□□□ 0.04
LIMD1-202ENST00000440097 MYH9P35579 1960 aaKnown RBP15.27■□□□□ 0.04
LIMD1-202ENST00000440097 MEFVO15553 781 aaPredicted RBP15.27■□□□□ 0.04
LIMD1-202ENST00000440097 STBD1O95210 358 aa15.27■□□□□ 0.04
LIMD1-202ENST00000440097 MARK3P27448 753 aa15.27■□□□□ 0.04
LIMD1-202ENST00000440097 ADSSP30520 456 aa15.27■□□□□ 0.04
LIMD1-202ENST00000440097 ICAM3P32942 547 aa15.27■□□□□ 0.04
LIMD1-202ENST00000440097 MAP2K1Q02750 393 aaPredicted RBP15.27■□□□□ 0.04
LIMD1-202ENST00000440097 Q3C1V9 767 aa15.27■□□□□ 0.04
LIMD1-202ENST00000440097 U2AF1L4Q8WU68 220 aaKnown RBP15.27■□□□□ 0.04
LIMD1-202ENST00000440097 GLG1Q92896 1179 aa15.27■□□□□ 0.04
LIMD1-202ENST00000440097 SLC10A4Q96EP9 437 aa15.27■□□□□ 0.04
LIMD1-202ENST00000440097 ZIM3Q96PE6 472 aa15.27■□□□□ 0.04
LIMD1-202ENST00000440097 JPH2Q9BR39 696 aaPredicted RBP15.27■□□□□ 0.04
LIMD1-202ENST00000440097 EHD2Q9NZN4 543 aa15.27■□□□□ 0.04
LIMD1-202ENST00000440097 ATXN2Q99700 1313 aaKnown RBP15.27■□□□□ 0.04
LIMD1-202ENST00000440097 IGSF9BQ9UPX0 1349 aa15.27■□□□□ 0.04
LIMD1-202ENST00000440097 NOP56O00567 594 aaKnown RBP15.27■□□□□ 0.03
LIMD1-202ENST00000440097 PALMO75781 387 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 CLSTN1O94985 981 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 FSBPO95073 299 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 SLC25A27O95847 323 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 FTCDO95954 541 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 ADRB2P07550 413 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 LIG4P49917 911 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 STRN3Q13033 797 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 NEDD9Q14511 834 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 PHLDB3Q6NSJ2 640 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 EMBQ6PCB8 327 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 C12orf56Q8IXR9 622 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 RNF10Q8N5U6 811 aaKnown RBP15.27■□□□□ 0.03
LIMD1-202ENST00000440097 MMP19Q99542 508 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 POP1Q99575 1024 aaKnown RBP15.27■□□□□ 0.03
LIMD1-202ENST00000440097 AZI2Q9H6S1 392 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 RBPJLQ9UBG7 517 aa15.27■□□□□ 0.03
LIMD1-202ENST00000440097 FARP2O94887 1054 aaPredicted RBP15.26■□□□□ 0.03
LIMD1-202ENST00000440097 KRT14P02533 472 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 CCDC172P0C7W6 258 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 TCF7P36402 384 aaPredicted RBP15.26■□□□□ 0.03
LIMD1-202ENST00000440097 NNTQ13423 1086 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 NAB2Q15742 525 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 ZNF572Q7Z3I7 529 aaPredicted RBP15.26■□□□□ 0.03
LIMD1-202ENST00000440097 GLYCTKQ8IVS8 523 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 DEPTORQ8TB45 409 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 SPIRE2Q8WWL2 714 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 RUBCNQ92622 972 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 L3MBTL3Q96JM7 780 aaPredicted RBP15.26■□□□□ 0.03
LIMD1-202ENST00000440097 MAF1Q9H063 256 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 STIM2Q9P246 746 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 CYP2C8P10632 490 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 ATP4AP20648 1035 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 STAT5BP51692 787 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 SNRPFP62306 86 aaKnown RBP15.26■□□□□ 0.03
LIMD1-202ENST00000440097 PTPROQ16827 1216 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 PPM1KQ8N3J5 372 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 HVCN1Q96D96 273 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 FAM213AQ9BRX8 229 aa15.26■□□□□ 0.03
LIMD1-202ENST00000440097 MAFBQ9Y5Q3 323 aaPredicted RBP15.26■□□□□ 0.03
LIMD1-202ENST00000440097 PRKCIP41743 596 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 PLEKHO2Q8TD55 490 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 CAVIN3Q969G5 261 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 RNPC3Q96LT9 517 aaKnown RBP15.25■□□□□ 0.03
LIMD1-202ENST00000440097 OSBPL9Q96SU4 736 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 NTPCRQ9BSD7 190 aaKnown RBP15.25■□□□□ 0.03
LIMD1-202ENST00000440097 TAF1DQ9H5J8 278 aaPredicted RBP15.25■□□□□ 0.03
LIMD1-202ENST00000440097 KCNH4Q9UQ05 1017 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 HYOU1Q9Y4L1 999 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 GLTPD2A6NH11 291 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 A6NNZ2 444 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 CNMDO75829 334 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 GUCY1A3Q02108 690 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 ITIH3Q06033 890 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 SNAPC2Q13487 334 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 TUBB8Q3ZCM7 444 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 C10orf76Q5T2E6 689 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 FAM160B1Q5W0V3 765 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 TMEM117Q9H0C3 514 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 CD248Q9HCU0 757 aa15.25■□□□□ 0.03
LIMD1-202ENST00000440097 PACSIN2Q9UNF0 486 aaPredicted RBP15.25■□□□□ 0.03
LIMD1-202ENST00000440097 IQCA1LA6NCM1 817 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 FOXN3O00409 490 aaPredicted RBP15.24■□□□□ 0.03
LIMD1-202ENST00000440097 TCP1P17987 556 aaKnown RBP15.24■□□□□ 0.03
LIMD1-202ENST00000440097 ABCB4P21439 1286 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 LSP1P33241 339 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 NAA35Q5VZE5 725 aa15.24■□□□□ 0.03
LIMD1-202ENST00000440097 MAP1SQ66K74 1059 aaPredicted RBP15.24■□□□□ 0.03
LIMD1-202ENST00000440097 USP37Q86T82 979 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms