RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 TMTC4Q5T4D3 741 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 PHLDB3Q6NSJ2 640 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 RNF180Q86T96 592 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 PYROXD1Q8WU10 500 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 NMRK2Q9NPI5 230 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 INTS9Q9NV88 658 aaKnown RBP8.99□□□□□ -0.97
UBR4-206ENST00000419533 EHD2Q9NZN4 543 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 NRBP1Q9UHY1 535 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 ATP8A1Q9Y2Q0 1164 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 ZNF541Q9H0D2 1346 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 TRIM49BA6NDI0 452 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 CCDC188H7C350 402 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 TADA2AO75478 443 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 CYBBP04839 570 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 KRT7P08729 469 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 TAC1P20366 129 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 STILQ15468 1287 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 TAF1BQ53T94 588 aaPredicted RBP8.99□□□□□ -0.97
UBR4-206ENST00000419533 FBXL13Q8NEE6 735 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 C11orf70Q9BRQ4 267 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 SLC38A7Q9NVC3 462 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 RRN3P2A6NIE6 340 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 PODXLO00592 558 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 PDXKO00764 312 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 MAP3K7O43318 606 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 RPS6KA5O75582 802 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 CLNS1AP54105 237 aaKnown RBP8.99□□□□□ -0.97
UBR4-206ENST00000419533 RBP5P82980 135 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 SF3A3Q12874 501 aaKnown RBP eCLIP8.99□□□□□ -0.972e-6■■■■□ 25.6
UBR4-206ENST00000419533 TRIP13Q15645 432 aaPredicted RBP8.99□□□□□ -0.97
UBR4-206ENST00000419533 FRMD5Q7Z6J6 570 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 MAP3K14Q99558 947 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 BPIFA3Q9BQP9 254 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 SP110Q9HB58 689 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 DDX56Q9NY93 547 aaKnown RBP8.99□□□□□ -0.97
UBR4-206ENST00000419533 SLC16A3O15427 465 aaKnown RBP8.99□□□□□ -0.97
UBR4-206ENST00000419533 CREB3O43889 395 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 RASA1P20936 1047 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 ATP1A2P50993 1020 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 DRP2Q13474 957 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 LAMC2Q13753 1193 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 NBPF12Q5TAG4 269 aaPredicted RBP8.99□□□□□ -0.97
UBR4-206ENST00000419533 ITPRIPL1Q6GPH6 555 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 APPL2Q8NEU8 664 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 MORC4Q8TE76 937 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 CPSF2Q9P2I0 782 aaKnown RBP8.99□□□□□ -0.97
UBR4-206ENST00000419533 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.99□□□□□ -0.97
UBR4-206ENST00000419533 RGPD5Q99666 1765 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 CRYBG1Q9Y4K1 1723 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 EXOC1LA0A1B0GW35 172 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 H3BRJ5 948 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 TXNDC9O14530 226 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 NVLO15381 856 aaKnown RBP8.99□□□□□ -0.97
UBR4-206ENST00000419533 CAP2P40123 477 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 CDK17Q00537 523 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 DHX9Q08211 1270 aaKnown RBP8.99□□□□□ -0.97
UBR4-206ENST00000419533 C2orf54Q08AI8 447 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 SNX17Q15036 470 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 LLGL1Q15334 1064 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 PTPN21Q16825 1174 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 CEP120Q8N960 986 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 SCG3Q8WXD2 468 aaKnown RBP8.99□□□□□ -0.97
UBR4-206ENST00000419533 C10orf71Q711Q0 1435 aa8.99□□□□□ -0.97
UBR4-206ENST00000419533 CXCR5P32302 372 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 GRIK1P39086 918 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 CASP2P42575 452 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 ARL4CP56559 192 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 EXOSC10Q01780 885 aaKnown RBP8.98□□□□□ -0.97
UBR4-206ENST00000419533 PPIL2Q13356 520 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 KCTD17Q8N5Z5 321 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 EFHBQ8N7U6 833 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 DYRK4Q9NR20 520 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 ERAP1Q9NZ08 941 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 FKTNO75072 461 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 SUN1O94901 812 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 CD4P01730 458 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 CTSHP09668 335 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 PDHBP11177 359 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 ZFXP17010 805 aaPredicted RBP8.98□□□□□ -0.97
UBR4-206ENST00000419533 WHAMMQ8TF30 809 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 PDCD6IPQ8WUM4 868 aaKnown RBP8.98□□□□□ -0.97
UBR4-206ENST00000419533 PHF20Q9BVI0 1012 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 EHD4Q9H223 541 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 LSM7Q9UK45 103 aaKnown RBP8.98□□□□□ -0.97
UBR4-206ENST00000419533 C4BP0C0L5 1744 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 KCPQ6ZWJ8 1503 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 LRRC53A6NM62 1247 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 HBP1O60381 514 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 ITGA4P13612 1032 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 SCP2P22307 547 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 CUL1Q13616 776 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 KCNB1Q14721 858 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 DRAP1Q14919 205 aaPredicted RBP8.98□□□□□ -0.97
UBR4-206ENST00000419533 EMC2Q15006 297 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 ACCSLQ4AC99 568 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 FRA10AC1Q70Z53 315 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 MOV10L1Q9BXT6 1211 aaKnown RBP8.98□□□□□ -0.97
UBR4-206ENST00000419533 ABCF3Q9NUQ8 709 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 EMSYQ7Z589 1322 aa8.98□□□□□ -0.97
UBR4-206ENST00000419533 FGGP02679 453 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms